Gene : Lsat_1_v5_gn_7_47401 L. sativa V8
Defline:  (1 of 2) PTHR12136//PTHR12136:SF49 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // SUBFAMILY NOT NAMED Genomic Order:  1548
Name:  ? Lsat_1_v5_gn_7_47401 Secondary Identifier:  ? PAC:38913246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_47401 0.5kb upstream 0.5kb upstream 8859   true Lsat_1_v8_lg_7: 66813160-66822018 Lactuca sativa
Lsat_1_v5_gn_7_47401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 66813160-66813659 Lactuca sativa
Lsat_1_v5_gn_7_47401 0.5kb downstream 0.5kb downstream 8859   true Lsat_1_v8_lg_7: 66813660-66822518 Lactuca sativa
Lsat_1_v5_gn_7_47401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 66822019-66822518 Lactuca sativa
Lsat_1_v5_gn_7_47401 1.0kb upstream 1.0kb upstream 9359   true Lsat_1_v8_lg_7: 66812660-66822018 Lactuca sativa
Lsat_1_v5_gn_7_47401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 66812660-66813659 Lactuca sativa
Lsat_1_v5_gn_7_47401 1.0kb downstream 1.0kb downstream 9359   true Lsat_1_v8_lg_7: 66813660-66823018 Lactuca sativa
Lsat_1_v5_gn_7_47401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 66822019-66823018 Lactuca sativa
Lsat_1_v5_gn_7_47401 2.0kb upstream 2.0kb upstream 10359   true Lsat_1_v8_lg_7: 66811660-66822018 Lactuca sativa
Lsat_1_v5_gn_7_47401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 66811660-66813659 Lactuca sativa
Lsat_1_v5_gn_7_47401 2.0kb downstream 2.0kb downstream 10359   true Lsat_1_v8_lg_7: 66813660-66824018 Lactuca sativa
Lsat_1_v5_gn_7_47401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 66822019-66824018 Lactuca sativa
Lsat_1_v5_gn_7_47401 5.0kb upstream 5.0kb upstream 13359   true Lsat_1_v8_lg_7: 66808660-66822018 Lactuca sativa
Lsat_1_v5_gn_7_47401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 66808660-66813659 Lactuca sativa
Lsat_1_v5_gn_7_47401 5.0kb downstream 5.0kb downstream 13359   true Lsat_1_v8_lg_7: 66813660-66827018 Lactuca sativa
Lsat_1_v5_gn_7_47401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 66822019-66827018 Lactuca sativa
Lsat_1_v5_gn_7_47401 10.0kb upstream 10.0kb upstream 18359   true Lsat_1_v8_lg_7: 66803660-66822018 Lactuca sativa
Lsat_1_v5_gn_7_47401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 66803660-66813659 Lactuca sativa
Lsat_1_v5_gn_7_47401 10.0kb downstream 10.0kb downstream 18359   true Lsat_1_v8_lg_7: 66813660-66832018 Lactuca sativa
Lsat_1_v5_gn_7_47401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 66822019-66832018 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476735 5263 Asterids View MSA
123742206 5271 Pentapetalae View MSA
122790410 5272 Eudicot View MSA
122042175 5273 Angiosperm View MSA
121350170 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain