Gene : Lsat_1_v5_gn_7_47701 L. sativa V8
Defline:  (1 of 5) PTHR10766//PTHR10766:SF54 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  1541
Name:  ? Lsat_1_v5_gn_7_47701 Secondary Identifier:  ? PAC:38911349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_47701 0.5kb upstream 0.5kb upstream 2826   true Lsat_1_v8_lg_7: 66410328-66413153 Lactuca sativa
Lsat_1_v5_gn_7_47701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 66410328-66410827 Lactuca sativa
Lsat_1_v5_gn_7_47701 0.5kb downstream 0.5kb downstream 2826   true Lsat_1_v8_lg_7: 66410828-66413653 Lactuca sativa
Lsat_1_v5_gn_7_47701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 66413154-66413653 Lactuca sativa
Lsat_1_v5_gn_7_47701 1.0kb upstream 1.0kb upstream 3326   true Lsat_1_v8_lg_7: 66409828-66413153 Lactuca sativa
Lsat_1_v5_gn_7_47701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 66409828-66410827 Lactuca sativa
Lsat_1_v5_gn_7_47701 1.0kb downstream 1.0kb downstream 3326   true Lsat_1_v8_lg_7: 66410828-66414153 Lactuca sativa
Lsat_1_v5_gn_7_47701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 66413154-66414153 Lactuca sativa
Lsat_1_v5_gn_7_47701 2.0kb upstream 2.0kb upstream 4326   true Lsat_1_v8_lg_7: 66408828-66413153 Lactuca sativa
Lsat_1_v5_gn_7_47701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 66408828-66410827 Lactuca sativa
Lsat_1_v5_gn_7_47701 2.0kb downstream 2.0kb downstream 4326   true Lsat_1_v8_lg_7: 66410828-66415153 Lactuca sativa
Lsat_1_v5_gn_7_47701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 66413154-66415153 Lactuca sativa
Lsat_1_v5_gn_7_47701 5.0kb upstream 5.0kb upstream 7326   true Lsat_1_v8_lg_7: 66405828-66413153 Lactuca sativa
Lsat_1_v5_gn_7_47701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 66405828-66410827 Lactuca sativa
Lsat_1_v5_gn_7_47701 5.0kb downstream 5.0kb downstream 7326   true Lsat_1_v8_lg_7: 66410828-66418153 Lactuca sativa
Lsat_1_v5_gn_7_47701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 66413154-66418153 Lactuca sativa
Lsat_1_v5_gn_7_47701 10.0kb upstream 10.0kb upstream 12326   true Lsat_1_v8_lg_7: 66400828-66413153 Lactuca sativa
Lsat_1_v5_gn_7_47701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 66400828-66410827 Lactuca sativa
Lsat_1_v5_gn_7_47701 10.0kb downstream 10.0kb downstream 12326   true Lsat_1_v8_lg_7: 66410828-66423153 Lactuca sativa
Lsat_1_v5_gn_7_47701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 66413154-66423153 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121447278 5263 Asterids Singleton cluster - no MSA
123755997 5271 Pentapetalae View MSA
122798731 5272 Eudicot View MSA
122045331 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain