Gene : Lsat_1_v5_gn_7_93140 L. sativa V8
Defline:  (1 of 3) PTHR31042//PTHR31042:SF2 - FAMILY NOT NAMED // CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  2787
Name:  ? Lsat_1_v5_gn_7_93140 Secondary Identifier:  ? PAC:38910646
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_93140 0.5kb upstream 0.5kb upstream 3606   true Lsat_1_v8_lg_7: 158184531-158188136 Lactuca sativa
Lsat_1_v5_gn_7_93140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 158187637-158188136 Lactuca sativa
Lsat_1_v5_gn_7_93140 0.5kb downstream 0.5kb downstream 3606   true Lsat_1_v8_lg_7: 158184031-158187636 Lactuca sativa
Lsat_1_v5_gn_7_93140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 158184031-158184530 Lactuca sativa
Lsat_1_v5_gn_7_93140 1.0kb upstream 1.0kb upstream 4106   true Lsat_1_v8_lg_7: 158184531-158188636 Lactuca sativa
Lsat_1_v5_gn_7_93140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 158187637-158188636 Lactuca sativa
Lsat_1_v5_gn_7_93140 1.0kb downstream 1.0kb downstream 4106   true Lsat_1_v8_lg_7: 158183531-158187636 Lactuca sativa
Lsat_1_v5_gn_7_93140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 158183531-158184530 Lactuca sativa
Lsat_1_v5_gn_7_93140 2.0kb upstream 2.0kb upstream 5106   true Lsat_1_v8_lg_7: 158184531-158189636 Lactuca sativa
Lsat_1_v5_gn_7_93140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 158187637-158189636 Lactuca sativa
Lsat_1_v5_gn_7_93140 2.0kb downstream 2.0kb downstream 5106   true Lsat_1_v8_lg_7: 158182531-158187636 Lactuca sativa
Lsat_1_v5_gn_7_93140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 158182531-158184530 Lactuca sativa
Lsat_1_v5_gn_7_93140 5.0kb upstream 5.0kb upstream 8106   true Lsat_1_v8_lg_7: 158184531-158192636 Lactuca sativa
Lsat_1_v5_gn_7_93140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 158187637-158192636 Lactuca sativa
Lsat_1_v5_gn_7_93140 5.0kb downstream 5.0kb downstream 8106   true Lsat_1_v8_lg_7: 158179531-158187636 Lactuca sativa
Lsat_1_v5_gn_7_93140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 158179531-158184530 Lactuca sativa
Lsat_1_v5_gn_7_93140 10.0kb upstream 10.0kb upstream 13106   true Lsat_1_v8_lg_7: 158184531-158197636 Lactuca sativa
Lsat_1_v5_gn_7_93140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 158187637-158197636 Lactuca sativa
Lsat_1_v5_gn_7_93140 10.0kb downstream 10.0kb downstream 13106   true Lsat_1_v8_lg_7: 158174531-158187636 Lactuca sativa
Lsat_1_v5_gn_7_93140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 158174531-158184530 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469311 5263 Asterids View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain