Gene : Lsat_1_v5_gn_7_93060 L. sativa V8
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  2790
Name:  ? Lsat_1_v5_gn_7_93060 Secondary Identifier:  ? PAC:38914855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_93060 0.5kb upstream 0.5kb upstream 3055   true Lsat_1_v8_lg_7: 158207837-158210891 Lactuca sativa
Lsat_1_v5_gn_7_93060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 158210392-158210891 Lactuca sativa
Lsat_1_v5_gn_7_93060 0.5kb downstream 0.5kb downstream 3055   true Lsat_1_v8_lg_7: 158207337-158210391 Lactuca sativa
Lsat_1_v5_gn_7_93060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 158207337-158207836 Lactuca sativa
Lsat_1_v5_gn_7_93060 1.0kb upstream 1.0kb upstream 3555   true Lsat_1_v8_lg_7: 158207837-158211391 Lactuca sativa
Lsat_1_v5_gn_7_93060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 158210392-158211391 Lactuca sativa
Lsat_1_v5_gn_7_93060 1.0kb downstream 1.0kb downstream 3555   true Lsat_1_v8_lg_7: 158206837-158210391 Lactuca sativa
Lsat_1_v5_gn_7_93060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 158206837-158207836 Lactuca sativa
Lsat_1_v5_gn_7_93060 2.0kb upstream 2.0kb upstream 4555   true Lsat_1_v8_lg_7: 158207837-158212391 Lactuca sativa
Lsat_1_v5_gn_7_93060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 158210392-158212391 Lactuca sativa
Lsat_1_v5_gn_7_93060 2.0kb downstream 2.0kb downstream 4555   true Lsat_1_v8_lg_7: 158205837-158210391 Lactuca sativa
Lsat_1_v5_gn_7_93060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 158205837-158207836 Lactuca sativa
Lsat_1_v5_gn_7_93060 5.0kb upstream 5.0kb upstream 7555   true Lsat_1_v8_lg_7: 158207837-158215391 Lactuca sativa
Lsat_1_v5_gn_7_93060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 158210392-158215391 Lactuca sativa
Lsat_1_v5_gn_7_93060 5.0kb downstream 5.0kb downstream 7555   true Lsat_1_v8_lg_7: 158202837-158210391 Lactuca sativa
Lsat_1_v5_gn_7_93060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 158202837-158207836 Lactuca sativa
Lsat_1_v5_gn_7_93060 10.0kb upstream 10.0kb upstream 12555   true Lsat_1_v8_lg_7: 158207837-158220391 Lactuca sativa
Lsat_1_v5_gn_7_93060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 158210392-158220391 Lactuca sativa
Lsat_1_v5_gn_7_93060 10.0kb downstream 10.0kb downstream 12555   true Lsat_1_v8_lg_7: 158197837-158210391 Lactuca sativa
Lsat_1_v5_gn_7_93060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 158197837-158207836 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466660 5263 Asterids View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain