Gene : Lsat_1_v5_gn_7_96121 L. sativa V8
Defline:  (1 of 39) PF03000 - NPH3 family (NPH3) Genomic Order:  2872
Name:  ? Lsat_1_v5_gn_7_96121 Secondary Identifier:  ? PAC:38912467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_96121 0.5kb upstream 0.5kb upstream 3881   true Lsat_1_v8_lg_7: 163368875-163372755 Lactuca sativa
Lsat_1_v5_gn_7_96121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 163372256-163372755 Lactuca sativa
Lsat_1_v5_gn_7_96121 0.5kb downstream 0.5kb downstream 3881   true Lsat_1_v8_lg_7: 163368375-163372255 Lactuca sativa
Lsat_1_v5_gn_7_96121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 163368375-163368874 Lactuca sativa
Lsat_1_v5_gn_7_96121 1.0kb upstream 1.0kb upstream 4381   true Lsat_1_v8_lg_7: 163368875-163373255 Lactuca sativa
Lsat_1_v5_gn_7_96121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 163372256-163373255 Lactuca sativa
Lsat_1_v5_gn_7_96121 1.0kb downstream 1.0kb downstream 4381   true Lsat_1_v8_lg_7: 163367875-163372255 Lactuca sativa
Lsat_1_v5_gn_7_96121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 163367875-163368874 Lactuca sativa
Lsat_1_v5_gn_7_96121 2.0kb upstream 2.0kb upstream 5381   true Lsat_1_v8_lg_7: 163368875-163374255 Lactuca sativa
Lsat_1_v5_gn_7_96121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 163372256-163374255 Lactuca sativa
Lsat_1_v5_gn_7_96121 2.0kb downstream 2.0kb downstream 5381   true Lsat_1_v8_lg_7: 163366875-163372255 Lactuca sativa
Lsat_1_v5_gn_7_96121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 163366875-163368874 Lactuca sativa
Lsat_1_v5_gn_7_96121 5.0kb upstream 5.0kb upstream 8381   true Lsat_1_v8_lg_7: 163368875-163377255 Lactuca sativa
Lsat_1_v5_gn_7_96121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 163372256-163377255 Lactuca sativa
Lsat_1_v5_gn_7_96121 5.0kb downstream 5.0kb downstream 8381   true Lsat_1_v8_lg_7: 163363875-163372255 Lactuca sativa
Lsat_1_v5_gn_7_96121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 163363875-163368874 Lactuca sativa
Lsat_1_v5_gn_7_96121 10.0kb upstream 10.0kb upstream 13381   true Lsat_1_v8_lg_7: 163368875-163382255 Lactuca sativa
Lsat_1_v5_gn_7_96121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 163372256-163382255 Lactuca sativa
Lsat_1_v5_gn_7_96121 10.0kb downstream 10.0kb downstream 13381   true Lsat_1_v8_lg_7: 163358875-163372255 Lactuca sativa
Lsat_1_v5_gn_7_96121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 163358875-163368874 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466990 5263 Asterids View MSA
123736783 5271 Pentapetalae View MSA
122790175 5272 Eudicot View MSA
122044122 5273 Angiosperm View MSA
121348430 5274 Embryophyte View MSA
123380863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain