Gene : Lsat_1_v5_gn_7_98341 L. sativa V8
Defline:  (1 of 10) PTHR23321//PTHR23321:SF31 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR // RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  2946
Name:  ? Lsat_1_v5_gn_7_98341 Secondary Identifier:  ? PAC:38911067
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CALVIN-PWY Lactuca sativa pathologic  
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_98341 0.5kb upstream 0.5kb upstream 953   true Lsat_1_v8_lg_7: 165892165-165893117 Lactuca sativa
Lsat_1_v5_gn_7_98341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 165892165-165892664 Lactuca sativa
Lsat_1_v5_gn_7_98341 0.5kb downstream 0.5kb downstream 953   true Lsat_1_v8_lg_7: 165892665-165893617 Lactuca sativa
Lsat_1_v5_gn_7_98341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 165893118-165893617 Lactuca sativa
Lsat_1_v5_gn_7_98341 1.0kb upstream 1.0kb upstream 1453   true Lsat_1_v8_lg_7: 165891665-165893117 Lactuca sativa
Lsat_1_v5_gn_7_98341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 165891665-165892664 Lactuca sativa
Lsat_1_v5_gn_7_98341 1.0kb downstream 1.0kb downstream 1453   true Lsat_1_v8_lg_7: 165892665-165894117 Lactuca sativa
Lsat_1_v5_gn_7_98341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 165893118-165894117 Lactuca sativa
Lsat_1_v5_gn_7_98341 2.0kb upstream 2.0kb upstream 2453   true Lsat_1_v8_lg_7: 165890665-165893117 Lactuca sativa
Lsat_1_v5_gn_7_98341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 165890665-165892664 Lactuca sativa
Lsat_1_v5_gn_7_98341 2.0kb downstream 2.0kb downstream 2453   true Lsat_1_v8_lg_7: 165892665-165895117 Lactuca sativa
Lsat_1_v5_gn_7_98341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 165893118-165895117 Lactuca sativa
Lsat_1_v5_gn_7_98341 5.0kb upstream 5.0kb upstream 5453   true Lsat_1_v8_lg_7: 165887665-165893117 Lactuca sativa
Lsat_1_v5_gn_7_98341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 165887665-165892664 Lactuca sativa
Lsat_1_v5_gn_7_98341 5.0kb downstream 5.0kb downstream 5453   true Lsat_1_v8_lg_7: 165892665-165898117 Lactuca sativa
Lsat_1_v5_gn_7_98341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 165893118-165898117 Lactuca sativa
Lsat_1_v5_gn_7_98341 10.0kb upstream 10.0kb upstream 10453   true Lsat_1_v8_lg_7: 165882665-165893117 Lactuca sativa
Lsat_1_v5_gn_7_98341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 165882665-165892664 Lactuca sativa
Lsat_1_v5_gn_7_98341 10.0kb downstream 10.0kb downstream 10453   true Lsat_1_v8_lg_7: 165892665-165903117 Lactuca sativa
Lsat_1_v5_gn_7_98341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 165893118-165903117 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121451786 5263 Asterids View MSA
123751375 5271 Pentapetalae View MSA
122794662 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain