Gene : Lsat_1_v5_gn_1_78060 L. sativa V8

Defline:  (1 of 5) PTHR10555//PTHR10555:SF155 - SORTING NEXIN // SUBFAMILY NOT NAMED Genomic Order:  3342
Name:  ? Lsat_1_v5_gn_1_78060 Secondary Identifier:  ? PAC:38955762

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_78060 0.5kb upstream 0.5kb upstream 3330   true Lsat_1_v8_lg_8: 164009988-164013317 Lactuca sativa
Lsat_1_v5_gn_1_78060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 164012818-164013317 Lactuca sativa
Lsat_1_v5_gn_1_78060 0.5kb downstream 0.5kb downstream 3330   true Lsat_1_v8_lg_8: 164009488-164012817 Lactuca sativa
Lsat_1_v5_gn_1_78060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 164009488-164009987 Lactuca sativa
Lsat_1_v5_gn_1_78060 1.0kb upstream 1.0kb upstream 3830   true Lsat_1_v8_lg_8: 164009988-164013817 Lactuca sativa
Lsat_1_v5_gn_1_78060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 164012818-164013817 Lactuca sativa
Lsat_1_v5_gn_1_78060 1.0kb downstream 1.0kb downstream 3830   true Lsat_1_v8_lg_8: 164008988-164012817 Lactuca sativa
Lsat_1_v5_gn_1_78060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 164008988-164009987 Lactuca sativa
Lsat_1_v5_gn_1_78060 2.0kb upstream 2.0kb upstream 4830   true Lsat_1_v8_lg_8: 164009988-164014817 Lactuca sativa
Lsat_1_v5_gn_1_78060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 164012818-164014817 Lactuca sativa
Lsat_1_v5_gn_1_78060 2.0kb downstream 2.0kb downstream 4830   true Lsat_1_v8_lg_8: 164007988-164012817 Lactuca sativa
Lsat_1_v5_gn_1_78060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 164007988-164009987 Lactuca sativa
Lsat_1_v5_gn_1_78060 5.0kb upstream 5.0kb upstream 7830   true Lsat_1_v8_lg_8: 164009988-164017817 Lactuca sativa
Lsat_1_v5_gn_1_78060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 164012818-164017817 Lactuca sativa
Lsat_1_v5_gn_1_78060 5.0kb downstream 5.0kb downstream 7830   true Lsat_1_v8_lg_8: 164004988-164012817 Lactuca sativa
Lsat_1_v5_gn_1_78060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 164004988-164009987 Lactuca sativa
Lsat_1_v5_gn_1_78060 10.0kb upstream 10.0kb upstream 12830   true Lsat_1_v8_lg_8: 164009988-164022817 Lactuca sativa
Lsat_1_v5_gn_1_78060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 164012818-164022817 Lactuca sativa
Lsat_1_v5_gn_1_78060 10.0kb downstream 10.0kb downstream 12830   true Lsat_1_v8_lg_8: 163999988-164012817 Lactuca sativa
Lsat_1_v5_gn_1_78060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 163999988-164009987 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
121470239 5263 Asterids View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain