Gene : Lsat_1_v5_gn_8_105740 L. sativa V8
Defline:  (1 of 1) PTHR23132:SF0 - D-ALANINE--D-ALANINE LIGASE FAMILY PROTEIN Genomic Order:  3274
Name:  ? Lsat_1_v5_gn_8_105740 Secondary Identifier:  ? PAC:38951740
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_105740 0.5kb upstream 0.5kb upstream 11300   true Lsat_1_v8_lg_8: 157739977-157751276 Lactuca sativa
Lsat_1_v5_gn_8_105740 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 157750777-157751276 Lactuca sativa
Lsat_1_v5_gn_8_105740 0.5kb downstream 0.5kb downstream 11300   true Lsat_1_v8_lg_8: 157739477-157750776 Lactuca sativa
Lsat_1_v5_gn_8_105740 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 157739477-157739976 Lactuca sativa
Lsat_1_v5_gn_8_105740 1.0kb upstream 1.0kb upstream 11800   true Lsat_1_v8_lg_8: 157739977-157751776 Lactuca sativa
Lsat_1_v5_gn_8_105740 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 157750777-157751776 Lactuca sativa
Lsat_1_v5_gn_8_105740 1.0kb downstream 1.0kb downstream 11800   true Lsat_1_v8_lg_8: 157738977-157750776 Lactuca sativa
Lsat_1_v5_gn_8_105740 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 157738977-157739976 Lactuca sativa
Lsat_1_v5_gn_8_105740 2.0kb upstream 2.0kb upstream 12800   true Lsat_1_v8_lg_8: 157739977-157752776 Lactuca sativa
Lsat_1_v5_gn_8_105740 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 157750777-157752776 Lactuca sativa
Lsat_1_v5_gn_8_105740 2.0kb downstream 2.0kb downstream 12800   true Lsat_1_v8_lg_8: 157737977-157750776 Lactuca sativa
Lsat_1_v5_gn_8_105740 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 157737977-157739976 Lactuca sativa
Lsat_1_v5_gn_8_105740 5.0kb upstream 5.0kb upstream 15800   true Lsat_1_v8_lg_8: 157739977-157755776 Lactuca sativa
Lsat_1_v5_gn_8_105740 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 157750777-157755776 Lactuca sativa
Lsat_1_v5_gn_8_105740 5.0kb downstream 5.0kb downstream 15800   true Lsat_1_v8_lg_8: 157734977-157750776 Lactuca sativa
Lsat_1_v5_gn_8_105740 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 157734977-157739976 Lactuca sativa
Lsat_1_v5_gn_8_105740 10.0kb upstream 10.0kb upstream 20800   true Lsat_1_v8_lg_8: 157739977-157760776 Lactuca sativa
Lsat_1_v5_gn_8_105740 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 157750777-157760776 Lactuca sativa
Lsat_1_v5_gn_8_105740 10.0kb downstream 10.0kb downstream 20800   true Lsat_1_v8_lg_8: 157729977-157750776 Lactuca sativa
Lsat_1_v5_gn_8_105740 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 157729977-157739976 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466984 5263 Asterids View MSA
123747604 5271 Pentapetalae View MSA
122787402 5272 Eudicot View MSA
122042671 5273 Angiosperm View MSA
121345291 5274 Embryophyte View MSA
123380188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain