Gene : Lsat_1_v5_gn_8_108920 L. sativa V8
Defline:  (1 of 1) PTHR30031//PTHR30031:SF2 - PHOSPHOENOLPYRUVATE CARBOXYKINASE ATP // SUBFAMILY NOT NAMED Genomic Order:  3366
Name:  ? Lsat_1_v5_gn_8_108920 Secondary Identifier:  ? PAC:38956513
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PWY-561 Lactuca sativa pathologic  
Lsativa PWY-7117 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_108920 0.5kb upstream 0.5kb upstream 3710   true Lsat_1_v8_lg_8: 166106710-166110419 Lactuca sativa
Lsat_1_v5_gn_8_108920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 166109920-166110419 Lactuca sativa
Lsat_1_v5_gn_8_108920 0.5kb downstream 0.5kb downstream 3710   true Lsat_1_v8_lg_8: 166106210-166109919 Lactuca sativa
Lsat_1_v5_gn_8_108920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 166106210-166106709 Lactuca sativa
Lsat_1_v5_gn_8_108920 1.0kb upstream 1.0kb upstream 4210   true Lsat_1_v8_lg_8: 166106710-166110919 Lactuca sativa
Lsat_1_v5_gn_8_108920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 166109920-166110919 Lactuca sativa
Lsat_1_v5_gn_8_108920 1.0kb downstream 1.0kb downstream 4210   true Lsat_1_v8_lg_8: 166105710-166109919 Lactuca sativa
Lsat_1_v5_gn_8_108920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 166105710-166106709 Lactuca sativa
Lsat_1_v5_gn_8_108920 2.0kb upstream 2.0kb upstream 5210   true Lsat_1_v8_lg_8: 166106710-166111919 Lactuca sativa
Lsat_1_v5_gn_8_108920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 166109920-166111919 Lactuca sativa
Lsat_1_v5_gn_8_108920 2.0kb downstream 2.0kb downstream 5210   true Lsat_1_v8_lg_8: 166104710-166109919 Lactuca sativa
Lsat_1_v5_gn_8_108920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 166104710-166106709 Lactuca sativa
Lsat_1_v5_gn_8_108920 5.0kb upstream 5.0kb upstream 8210   true Lsat_1_v8_lg_8: 166106710-166114919 Lactuca sativa
Lsat_1_v5_gn_8_108920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 166109920-166114919 Lactuca sativa
Lsat_1_v5_gn_8_108920 5.0kb downstream 5.0kb downstream 8210   true Lsat_1_v8_lg_8: 166101710-166109919 Lactuca sativa
Lsat_1_v5_gn_8_108920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 166101710-166106709 Lactuca sativa
Lsat_1_v5_gn_8_108920 10.0kb upstream 10.0kb upstream 13210   true Lsat_1_v8_lg_8: 166106710-166119919 Lactuca sativa
Lsat_1_v5_gn_8_108920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 166109920-166119919 Lactuca sativa
Lsat_1_v5_gn_8_108920 10.0kb downstream 10.0kb downstream 13210   true Lsat_1_v8_lg_8: 166096710-166109919 Lactuca sativa
Lsat_1_v5_gn_8_108920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 166096710-166106709 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464629 5263 Asterids View MSA
123745551 5271 Pentapetalae View MSA
122794160 5272 Eudicot View MSA
122049191 5273 Angiosperm View MSA
121348901 5274 Embryophyte View MSA
123381068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain