Gene : Lsat_1_v5_gn_7_71460 L. sativa V8
Defline:  (1 of 1) PTHR12785//PTHR12785:SF6//PTHR24296//PTHR24296:SF19 - FAMILY NOT NAMED // SPLICING FACTOR 3B SUBUNIT 2 // FAMILY NOT NAMED // SUBFAMILY NOT NAMED Genomic Order:  2152
Name:  ? Lsat_1_v5_gn_7_71460 Secondary Identifier:  ? PAC:38913534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_71460 0.5kb upstream 0.5kb upstream 10082   true Lsat_1_v8_lg_7: 116920193-116930274 Lactuca sativa
Lsat_1_v5_gn_7_71460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 116929775-116930274 Lactuca sativa
Lsat_1_v5_gn_7_71460 0.5kb downstream 0.5kb downstream 10082   true Lsat_1_v8_lg_7: 116919693-116929774 Lactuca sativa
Lsat_1_v5_gn_7_71460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 116919693-116920192 Lactuca sativa
Lsat_1_v5_gn_7_71460 1.0kb upstream 1.0kb upstream 10582   true Lsat_1_v8_lg_7: 116920193-116930774 Lactuca sativa
Lsat_1_v5_gn_7_71460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 116929775-116930774 Lactuca sativa
Lsat_1_v5_gn_7_71460 1.0kb downstream 1.0kb downstream 10582   true Lsat_1_v8_lg_7: 116919193-116929774 Lactuca sativa
Lsat_1_v5_gn_7_71460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 116919193-116920192 Lactuca sativa
Lsat_1_v5_gn_7_71460 2.0kb upstream 2.0kb upstream 11582   true Lsat_1_v8_lg_7: 116920193-116931774 Lactuca sativa
Lsat_1_v5_gn_7_71460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 116929775-116931774 Lactuca sativa
Lsat_1_v5_gn_7_71460 2.0kb downstream 2.0kb downstream 11582   true Lsat_1_v8_lg_7: 116918193-116929774 Lactuca sativa
Lsat_1_v5_gn_7_71460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 116918193-116920192 Lactuca sativa
Lsat_1_v5_gn_7_71460 5.0kb upstream 5.0kb upstream 14582   true Lsat_1_v8_lg_7: 116920193-116934774 Lactuca sativa
Lsat_1_v5_gn_7_71460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 116929775-116934774 Lactuca sativa
Lsat_1_v5_gn_7_71460 5.0kb downstream 5.0kb downstream 14582   true Lsat_1_v8_lg_7: 116915193-116929774 Lactuca sativa
Lsat_1_v5_gn_7_71460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 116915193-116920192 Lactuca sativa
Lsat_1_v5_gn_7_71460 10.0kb upstream 10.0kb upstream 19582   true Lsat_1_v8_lg_7: 116920193-116939774 Lactuca sativa
Lsat_1_v5_gn_7_71460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 116929775-116939774 Lactuca sativa
Lsat_1_v5_gn_7_71460 10.0kb downstream 10.0kb downstream 19582   true Lsat_1_v8_lg_7: 116910193-116929774 Lactuca sativa
Lsat_1_v5_gn_7_71460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 116910193-116920192 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121758713 5273 Angiosperm Singleton cluster - no MSA
121447569 5263 Asterids Singleton cluster - no MSA
123715640 5271 Pentapetalae Singleton cluster - no MSA
122749322 5272 Eudicot Singleton cluster - no MSA
121030410 5274 Embryophyte Singleton cluster - no MSA
123070539 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain