Gene : Lsat_1_v5_gn_7_72000 L. sativa V8
Defline:  (1 of 4) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  2143
Name:  ? Lsat_1_v5_gn_7_72000 Secondary Identifier:  ? PAC:38914903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_72000 0.5kb upstream 0.5kb upstream 2249   true Lsat_1_v8_lg_7: 116102745-116104993 Lactuca sativa
Lsat_1_v5_gn_7_72000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 116102745-116103244 Lactuca sativa
Lsat_1_v5_gn_7_72000 0.5kb downstream 0.5kb downstream 2249   true Lsat_1_v8_lg_7: 116103245-116105493 Lactuca sativa
Lsat_1_v5_gn_7_72000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 116104994-116105493 Lactuca sativa
Lsat_1_v5_gn_7_72000 1.0kb upstream 1.0kb upstream 2749   true Lsat_1_v8_lg_7: 116102245-116104993 Lactuca sativa
Lsat_1_v5_gn_7_72000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 116102245-116103244 Lactuca sativa
Lsat_1_v5_gn_7_72000 1.0kb downstream 1.0kb downstream 2749   true Lsat_1_v8_lg_7: 116103245-116105993 Lactuca sativa
Lsat_1_v5_gn_7_72000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 116104994-116105993 Lactuca sativa
Lsat_1_v5_gn_7_72000 2.0kb upstream 2.0kb upstream 3749   true Lsat_1_v8_lg_7: 116101245-116104993 Lactuca sativa
Lsat_1_v5_gn_7_72000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 116101245-116103244 Lactuca sativa
Lsat_1_v5_gn_7_72000 2.0kb downstream 2.0kb downstream 3749   true Lsat_1_v8_lg_7: 116103245-116106993 Lactuca sativa
Lsat_1_v5_gn_7_72000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 116104994-116106993 Lactuca sativa
Lsat_1_v5_gn_7_72000 5.0kb upstream 5.0kb upstream 6749   true Lsat_1_v8_lg_7: 116098245-116104993 Lactuca sativa
Lsat_1_v5_gn_7_72000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 116098245-116103244 Lactuca sativa
Lsat_1_v5_gn_7_72000 5.0kb downstream 5.0kb downstream 6749   true Lsat_1_v8_lg_7: 116103245-116109993 Lactuca sativa
Lsat_1_v5_gn_7_72000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 116104994-116109993 Lactuca sativa
Lsat_1_v5_gn_7_72000 10.0kb upstream 10.0kb upstream 11749   true Lsat_1_v8_lg_7: 116093245-116104993 Lactuca sativa
Lsat_1_v5_gn_7_72000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 116093245-116103244 Lactuca sativa
Lsat_1_v5_gn_7_72000 10.0kb downstream 10.0kb downstream 11749   true Lsat_1_v8_lg_7: 116103245-116114993 Lactuca sativa
Lsat_1_v5_gn_7_72000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 116104994-116114993 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480599 5263 Asterids View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain