Gene : Lsat_1_v5_gn_7_8101 L. sativa V8
Defline:  (1 of 16) PF01988 - VIT family (VIT1) Genomic Order:  199
Name:  ? Lsat_1_v5_gn_7_8101 Secondary Identifier:  ? PAC:38914553
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_8101 0.5kb upstream 0.5kb upstream 1696   true Lsat_1_v8_lg_7: 7196205-7197900 Lactuca sativa
Lsat_1_v5_gn_7_8101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 7196205-7196704 Lactuca sativa
Lsat_1_v5_gn_7_8101 0.5kb downstream 0.5kb downstream 1696   true Lsat_1_v8_lg_7: 7196705-7198400 Lactuca sativa
Lsat_1_v5_gn_7_8101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 7197901-7198400 Lactuca sativa
Lsat_1_v5_gn_7_8101 1.0kb upstream 1.0kb upstream 2196   true Lsat_1_v8_lg_7: 7195705-7197900 Lactuca sativa
Lsat_1_v5_gn_7_8101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 7195705-7196704 Lactuca sativa
Lsat_1_v5_gn_7_8101 1.0kb downstream 1.0kb downstream 2196   true Lsat_1_v8_lg_7: 7196705-7198900 Lactuca sativa
Lsat_1_v5_gn_7_8101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 7197901-7198900 Lactuca sativa
Lsat_1_v5_gn_7_8101 2.0kb upstream 2.0kb upstream 3196   true Lsat_1_v8_lg_7: 7194705-7197900 Lactuca sativa
Lsat_1_v5_gn_7_8101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 7194705-7196704 Lactuca sativa
Lsat_1_v5_gn_7_8101 2.0kb downstream 2.0kb downstream 3196   true Lsat_1_v8_lg_7: 7196705-7199900 Lactuca sativa
Lsat_1_v5_gn_7_8101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 7197901-7199900 Lactuca sativa
Lsat_1_v5_gn_7_8101 5.0kb upstream 5.0kb upstream 6196   true Lsat_1_v8_lg_7: 7191705-7197900 Lactuca sativa
Lsat_1_v5_gn_7_8101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 7191705-7196704 Lactuca sativa
Lsat_1_v5_gn_7_8101 5.0kb downstream 5.0kb downstream 6196   true Lsat_1_v8_lg_7: 7196705-7202900 Lactuca sativa
Lsat_1_v5_gn_7_8101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 7197901-7202900 Lactuca sativa
Lsat_1_v5_gn_7_8101 10.0kb upstream 10.0kb upstream 11196   true Lsat_1_v8_lg_7: 7186705-7197900 Lactuca sativa
Lsat_1_v5_gn_7_8101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 7186705-7196704 Lactuca sativa
Lsat_1_v5_gn_7_8101 10.0kb downstream 10.0kb downstream 11196   true Lsat_1_v8_lg_7: 7196705-7207900 Lactuca sativa
Lsat_1_v5_gn_7_8101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 7197901-7207900 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791847 5273 Angiosperm View MSA
121471505 5263 Asterids View MSA
123742461 5271 Pentapetalae View MSA
122794648 5272 Eudicot View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain