Gene : Lsat_1_v5_gn_7_83740 L. sativa V8
Defline:  (1 of 2) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  2438
Name:  ? Lsat_1_v5_gn_7_83740 Secondary Identifier:  ? PAC:38913427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_83740 0.5kb upstream 0.5kb upstream 3011   true Lsat_1_v8_lg_7: 138630555-138633565 Lactuca sativa
Lsat_1_v5_gn_7_83740 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 138630555-138631054 Lactuca sativa
Lsat_1_v5_gn_7_83740 0.5kb downstream 0.5kb downstream 3011   true Lsat_1_v8_lg_7: 138631055-138634065 Lactuca sativa
Lsat_1_v5_gn_7_83740 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 138633566-138634065 Lactuca sativa
Lsat_1_v5_gn_7_83740 1.0kb upstream 1.0kb upstream 3511   true Lsat_1_v8_lg_7: 138630055-138633565 Lactuca sativa
Lsat_1_v5_gn_7_83740 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 138630055-138631054 Lactuca sativa
Lsat_1_v5_gn_7_83740 1.0kb downstream 1.0kb downstream 3511   true Lsat_1_v8_lg_7: 138631055-138634565 Lactuca sativa
Lsat_1_v5_gn_7_83740 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 138633566-138634565 Lactuca sativa
Lsat_1_v5_gn_7_83740 2.0kb upstream 2.0kb upstream 4511   true Lsat_1_v8_lg_7: 138629055-138633565 Lactuca sativa
Lsat_1_v5_gn_7_83740 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 138629055-138631054 Lactuca sativa
Lsat_1_v5_gn_7_83740 2.0kb downstream 2.0kb downstream 4511   true Lsat_1_v8_lg_7: 138631055-138635565 Lactuca sativa
Lsat_1_v5_gn_7_83740 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 138633566-138635565 Lactuca sativa
Lsat_1_v5_gn_7_83740 5.0kb upstream 5.0kb upstream 7511   true Lsat_1_v8_lg_7: 138626055-138633565 Lactuca sativa
Lsat_1_v5_gn_7_83740 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 138626055-138631054 Lactuca sativa
Lsat_1_v5_gn_7_83740 5.0kb downstream 5.0kb downstream 7511   true Lsat_1_v8_lg_7: 138631055-138638565 Lactuca sativa
Lsat_1_v5_gn_7_83740 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 138633566-138638565 Lactuca sativa
Lsat_1_v5_gn_7_83740 10.0kb upstream 10.0kb upstream 12511   true Lsat_1_v8_lg_7: 138621055-138633565 Lactuca sativa
Lsat_1_v5_gn_7_83740 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 138621055-138631054 Lactuca sativa
Lsat_1_v5_gn_7_83740 10.0kb downstream 10.0kb downstream 12511   true Lsat_1_v8_lg_7: 138631055-138643565 Lactuca sativa
Lsat_1_v5_gn_7_83740 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 138633566-138643565 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121447552 5263 Asterids Singleton cluster - no MSA
123752863 5271 Pentapetalae View MSA
122774828 5272 Eudicot View MSA
122051145 5273 Angiosperm View MSA
121347829 5274 Embryophyte View MSA
123380647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain