Gene : Lsat_1_v5_gn_8_137421 L. sativa V8
Defline:  (1 of 1) PF00155//PF04065 - Aminotransferase class I and II (Aminotran_1_2) // Not1 N-terminal domain, CCR4-Not complex component (Not3) Genomic Order:  4135
Name:  ? Lsat_1_v5_gn_8_137421 Secondary Identifier:  ? PAC:38956179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_137421 0.5kb upstream 0.5kb upstream 7532   true Lsat_1_v8_lg_8: 223049122-223056653 Lactuca sativa
Lsat_1_v5_gn_8_137421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 223056154-223056653 Lactuca sativa
Lsat_1_v5_gn_8_137421 0.5kb downstream 0.5kb downstream 7532   true Lsat_1_v8_lg_8: 223048622-223056153 Lactuca sativa
Lsat_1_v5_gn_8_137421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 223048622-223049121 Lactuca sativa
Lsat_1_v5_gn_8_137421 1.0kb upstream 1.0kb upstream 8032   true Lsat_1_v8_lg_8: 223049122-223057153 Lactuca sativa
Lsat_1_v5_gn_8_137421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 223056154-223057153 Lactuca sativa
Lsat_1_v5_gn_8_137421 1.0kb downstream 1.0kb downstream 8032   true Lsat_1_v8_lg_8: 223048122-223056153 Lactuca sativa
Lsat_1_v5_gn_8_137421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 223048122-223049121 Lactuca sativa
Lsat_1_v5_gn_8_137421 2.0kb upstream 2.0kb upstream 9032   true Lsat_1_v8_lg_8: 223049122-223058153 Lactuca sativa
Lsat_1_v5_gn_8_137421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 223056154-223058153 Lactuca sativa
Lsat_1_v5_gn_8_137421 2.0kb downstream 2.0kb downstream 9032   true Lsat_1_v8_lg_8: 223047122-223056153 Lactuca sativa
Lsat_1_v5_gn_8_137421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 223047122-223049121 Lactuca sativa
Lsat_1_v5_gn_8_137421 5.0kb upstream 5.0kb upstream 12032   true Lsat_1_v8_lg_8: 223049122-223061153 Lactuca sativa
Lsat_1_v5_gn_8_137421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 223056154-223061153 Lactuca sativa
Lsat_1_v5_gn_8_137421 5.0kb downstream 5.0kb downstream 12032   true Lsat_1_v8_lg_8: 223044122-223056153 Lactuca sativa
Lsat_1_v5_gn_8_137421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 223044122-223049121 Lactuca sativa
Lsat_1_v5_gn_8_137421 10.0kb upstream 10.0kb upstream 17032   true Lsat_1_v8_lg_8: 223049122-223066153 Lactuca sativa
Lsat_1_v5_gn_8_137421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 223056154-223066153 Lactuca sativa
Lsat_1_v5_gn_8_137421 10.0kb downstream 10.0kb downstream 17032   true Lsat_1_v8_lg_8: 223039122-223056153 Lactuca sativa
Lsat_1_v5_gn_8_137421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 223039122-223049121 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121448899 5263 Asterids Singleton cluster - no MSA
123748493 5271 Pentapetalae View MSA
122772656 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain