Gene : Lsat_1_v5_gn_8_14841 L. sativa V8
Defline:  (1 of 9) K10523 - speckle-type POZ protein (SPOP) Genomic Order:  507
Name:  ? Lsat_1_v5_gn_8_14841 Secondary Identifier:  ? PAC:38955518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_14841 0.5kb upstream 0.5kb upstream 2327   true Lsat_1_v8_lg_8: 18962428-18964754 Lactuca sativa
Lsat_1_v5_gn_8_14841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 18964255-18964754 Lactuca sativa
Lsat_1_v5_gn_8_14841 0.5kb downstream 0.5kb downstream 2327   true Lsat_1_v8_lg_8: 18961928-18964254 Lactuca sativa
Lsat_1_v5_gn_8_14841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 18961928-18962427 Lactuca sativa
Lsat_1_v5_gn_8_14841 1.0kb upstream 1.0kb upstream 2827   true Lsat_1_v8_lg_8: 18962428-18965254 Lactuca sativa
Lsat_1_v5_gn_8_14841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 18964255-18965254 Lactuca sativa
Lsat_1_v5_gn_8_14841 1.0kb downstream 1.0kb downstream 2827   true Lsat_1_v8_lg_8: 18961428-18964254 Lactuca sativa
Lsat_1_v5_gn_8_14841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 18961428-18962427 Lactuca sativa
Lsat_1_v5_gn_8_14841 2.0kb upstream 2.0kb upstream 3827   true Lsat_1_v8_lg_8: 18962428-18966254 Lactuca sativa
Lsat_1_v5_gn_8_14841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 18964255-18966254 Lactuca sativa
Lsat_1_v5_gn_8_14841 2.0kb downstream 2.0kb downstream 3827   true Lsat_1_v8_lg_8: 18960428-18964254 Lactuca sativa
Lsat_1_v5_gn_8_14841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 18960428-18962427 Lactuca sativa
Lsat_1_v5_gn_8_14841 5.0kb upstream 5.0kb upstream 6827   true Lsat_1_v8_lg_8: 18962428-18969254 Lactuca sativa
Lsat_1_v5_gn_8_14841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 18964255-18969254 Lactuca sativa
Lsat_1_v5_gn_8_14841 5.0kb downstream 5.0kb downstream 6827   true Lsat_1_v8_lg_8: 18957428-18964254 Lactuca sativa
Lsat_1_v5_gn_8_14841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 18957428-18962427 Lactuca sativa
Lsat_1_v5_gn_8_14841 10.0kb upstream 10.0kb upstream 11827   true Lsat_1_v8_lg_8: 18962428-18974254 Lactuca sativa
Lsat_1_v5_gn_8_14841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 18964255-18974254 Lactuca sativa
Lsat_1_v5_gn_8_14841 10.0kb downstream 10.0kb downstream 11827   true Lsat_1_v8_lg_8: 18952428-18964254 Lactuca sativa
Lsat_1_v5_gn_8_14841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 18952428-18962427 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471365 5263 Asterids View MSA
123739002 5271 Pentapetalae View MSA
122796766 5272 Eudicot View MSA
122042496 5273 Angiosperm View MSA
121309979 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain