Gene : Lsat_1_v5_gn_8_148361 L. sativa V8
Defline:  (1 of 3) PTHR31776//PTHR31776:SF0 - FAMILY NOT NAMED // ALPHA-L-ARABINOFURANOSIDASE 1-RELATED Genomic Order:  4391
Name:  ? Lsat_1_v5_gn_8_148361 Secondary Identifier:  ? PAC:38951978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_148361 0.5kb upstream 0.5kb upstream 3497   true Lsat_1_v8_lg_8: 249440320-249443816 Lactuca sativa
Lsat_1_v5_gn_8_148361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 249443317-249443816 Lactuca sativa
Lsat_1_v5_gn_8_148361 0.5kb downstream 0.5kb downstream 3497   true Lsat_1_v8_lg_8: 249439820-249443316 Lactuca sativa
Lsat_1_v5_gn_8_148361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 249439820-249440319 Lactuca sativa
Lsat_1_v5_gn_8_148361 1.0kb upstream 1.0kb upstream 3997   true Lsat_1_v8_lg_8: 249440320-249444316 Lactuca sativa
Lsat_1_v5_gn_8_148361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 249443317-249444316 Lactuca sativa
Lsat_1_v5_gn_8_148361 1.0kb downstream 1.0kb downstream 3997   true Lsat_1_v8_lg_8: 249439320-249443316 Lactuca sativa
Lsat_1_v5_gn_8_148361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 249439320-249440319 Lactuca sativa
Lsat_1_v5_gn_8_148361 2.0kb upstream 2.0kb upstream 4997   true Lsat_1_v8_lg_8: 249440320-249445316 Lactuca sativa
Lsat_1_v5_gn_8_148361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 249443317-249445316 Lactuca sativa
Lsat_1_v5_gn_8_148361 2.0kb downstream 2.0kb downstream 4997   true Lsat_1_v8_lg_8: 249438320-249443316 Lactuca sativa
Lsat_1_v5_gn_8_148361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 249438320-249440319 Lactuca sativa
Lsat_1_v5_gn_8_148361 5.0kb upstream 5.0kb upstream 7997   true Lsat_1_v8_lg_8: 249440320-249448316 Lactuca sativa
Lsat_1_v5_gn_8_148361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 249443317-249448316 Lactuca sativa
Lsat_1_v5_gn_8_148361 5.0kb downstream 5.0kb downstream 7997   true Lsat_1_v8_lg_8: 249435320-249443316 Lactuca sativa
Lsat_1_v5_gn_8_148361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 249435320-249440319 Lactuca sativa
Lsat_1_v5_gn_8_148361 10.0kb upstream 10.0kb upstream 12997   true Lsat_1_v8_lg_8: 249440320-249453316 Lactuca sativa
Lsat_1_v5_gn_8_148361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 249443317-249453316 Lactuca sativa
Lsat_1_v5_gn_8_148361 10.0kb downstream 10.0kb downstream 12997   true Lsat_1_v8_lg_8: 249430320-249443316 Lactuca sativa
Lsat_1_v5_gn_8_148361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 249430320-249440319 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027771 5273 Angiosperm View MSA
121448253 5263 Asterids Singleton cluster - no MSA
123744633 5271 Pentapetalae View MSA
122771182 5272 Eudicot View MSA
121297381 5274 Embryophyte View MSA
123425978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain