Gene : Lsat_1_v5_gn_8_148500 L. sativa V8
Defline:  (1 of 1) PTHR10891//PTHR10891:SF621//PTHR10891:SF622 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED // CALCIUM-BINDING PROTEIN CML37-RELATED Genomic Order:  4433
Name:  ? Lsat_1_v5_gn_8_148500 Secondary Identifier:  ? PAC:38952005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_148500 0.5kb upstream 0.5kb upstream 3153   true Lsat_1_v8_lg_8: 254124569-254127721 Lactuca sativa
Lsat_1_v5_gn_8_148500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 254127222-254127721 Lactuca sativa
Lsat_1_v5_gn_8_148500 0.5kb downstream 0.5kb downstream 3153   true Lsat_1_v8_lg_8: 254124069-254127221 Lactuca sativa
Lsat_1_v5_gn_8_148500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 254124069-254124568 Lactuca sativa
Lsat_1_v5_gn_8_148500 1.0kb upstream 1.0kb upstream 3653   true Lsat_1_v8_lg_8: 254124569-254128221 Lactuca sativa
Lsat_1_v5_gn_8_148500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 254127222-254128221 Lactuca sativa
Lsat_1_v5_gn_8_148500 1.0kb downstream 1.0kb downstream 3653   true Lsat_1_v8_lg_8: 254123569-254127221 Lactuca sativa
Lsat_1_v5_gn_8_148500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 254123569-254124568 Lactuca sativa
Lsat_1_v5_gn_8_148500 2.0kb upstream 2.0kb upstream 4653   true Lsat_1_v8_lg_8: 254124569-254129221 Lactuca sativa
Lsat_1_v5_gn_8_148500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 254127222-254129221 Lactuca sativa
Lsat_1_v5_gn_8_148500 2.0kb downstream 2.0kb downstream 4653   true Lsat_1_v8_lg_8: 254122569-254127221 Lactuca sativa
Lsat_1_v5_gn_8_148500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 254122569-254124568 Lactuca sativa
Lsat_1_v5_gn_8_148500 5.0kb upstream 5.0kb upstream 7653   true Lsat_1_v8_lg_8: 254124569-254132221 Lactuca sativa
Lsat_1_v5_gn_8_148500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 254127222-254132221 Lactuca sativa
Lsat_1_v5_gn_8_148500 5.0kb downstream 5.0kb downstream 7653   true Lsat_1_v8_lg_8: 254119569-254127221 Lactuca sativa
Lsat_1_v5_gn_8_148500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 254119569-254124568 Lactuca sativa
Lsat_1_v5_gn_8_148500 10.0kb upstream 10.0kb upstream 12653   true Lsat_1_v8_lg_8: 254124569-254137221 Lactuca sativa
Lsat_1_v5_gn_8_148500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 254127222-254137221 Lactuca sativa
Lsat_1_v5_gn_8_148500 10.0kb downstream 10.0kb downstream 12653   true Lsat_1_v8_lg_8: 254114569-254127221 Lactuca sativa
Lsat_1_v5_gn_8_148500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 254114569-254124568 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481486 5263 Asterids View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain