Gene : Lsat_1_v5_gn_8_14921 L. sativa V8
Defline:  (1 of 4) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  510
Name:  ? Lsat_1_v5_gn_8_14921 Secondary Identifier:  ? PAC:38953446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_14921 0.5kb upstream 0.5kb upstream 2044   true Lsat_1_v8_lg_8: 19063350-19065393 Lactuca sativa
Lsat_1_v5_gn_8_14921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 19064894-19065393 Lactuca sativa
Lsat_1_v5_gn_8_14921 0.5kb downstream 0.5kb downstream 2044   true Lsat_1_v8_lg_8: 19062850-19064893 Lactuca sativa
Lsat_1_v5_gn_8_14921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 19062850-19063349 Lactuca sativa
Lsat_1_v5_gn_8_14921 1.0kb upstream 1.0kb upstream 2544   true Lsat_1_v8_lg_8: 19063350-19065893 Lactuca sativa
Lsat_1_v5_gn_8_14921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 19064894-19065893 Lactuca sativa
Lsat_1_v5_gn_8_14921 1.0kb downstream 1.0kb downstream 2544   true Lsat_1_v8_lg_8: 19062350-19064893 Lactuca sativa
Lsat_1_v5_gn_8_14921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 19062350-19063349 Lactuca sativa
Lsat_1_v5_gn_8_14921 2.0kb upstream 2.0kb upstream 3544   true Lsat_1_v8_lg_8: 19063350-19066893 Lactuca sativa
Lsat_1_v5_gn_8_14921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 19064894-19066893 Lactuca sativa
Lsat_1_v5_gn_8_14921 2.0kb downstream 2.0kb downstream 3544   true Lsat_1_v8_lg_8: 19061350-19064893 Lactuca sativa
Lsat_1_v5_gn_8_14921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 19061350-19063349 Lactuca sativa
Lsat_1_v5_gn_8_14921 5.0kb upstream 5.0kb upstream 6544   true Lsat_1_v8_lg_8: 19063350-19069893 Lactuca sativa
Lsat_1_v5_gn_8_14921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 19064894-19069893 Lactuca sativa
Lsat_1_v5_gn_8_14921 5.0kb downstream 5.0kb downstream 6544   true Lsat_1_v8_lg_8: 19058350-19064893 Lactuca sativa
Lsat_1_v5_gn_8_14921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 19058350-19063349 Lactuca sativa
Lsat_1_v5_gn_8_14921 10.0kb upstream 10.0kb upstream 11544   true Lsat_1_v8_lg_8: 19063350-19074893 Lactuca sativa
Lsat_1_v5_gn_8_14921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 19064894-19074893 Lactuca sativa
Lsat_1_v5_gn_8_14921 10.0kb downstream 10.0kb downstream 11544   true Lsat_1_v8_lg_8: 19053350-19064893 Lactuca sativa
Lsat_1_v5_gn_8_14921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 19053350-19063349 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468664 5263 Asterids View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain