Gene : Lsat_1_v5_gn_8_149100 L. sativa V8
Defline:  (1 of 11) PTHR23130//PTHR23130:SF80 - FAMILY NOT NAMED // AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 Genomic Order:  4429
Name:  ? Lsat_1_v5_gn_8_149100 Secondary Identifier:  ? PAC:38956552
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_149100 0.5kb upstream 0.5kb upstream 1217   true Lsat_1_v8_lg_8: 253806465-253807681 Lactuca sativa
Lsat_1_v5_gn_8_149100 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 253807182-253807681 Lactuca sativa
Lsat_1_v5_gn_8_149100 0.5kb downstream 0.5kb downstream 1217   true Lsat_1_v8_lg_8: 253805965-253807181 Lactuca sativa
Lsat_1_v5_gn_8_149100 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 253805965-253806464 Lactuca sativa
Lsat_1_v5_gn_8_149100 1.0kb upstream 1.0kb upstream 1717   true Lsat_1_v8_lg_8: 253806465-253808181 Lactuca sativa
Lsat_1_v5_gn_8_149100 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 253807182-253808181 Lactuca sativa
Lsat_1_v5_gn_8_149100 1.0kb downstream 1.0kb downstream 1717   true Lsat_1_v8_lg_8: 253805465-253807181 Lactuca sativa
Lsat_1_v5_gn_8_149100 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 253805465-253806464 Lactuca sativa
Lsat_1_v5_gn_8_149100 2.0kb upstream 2.0kb upstream 2717   true Lsat_1_v8_lg_8: 253806465-253809181 Lactuca sativa
Lsat_1_v5_gn_8_149100 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 253807182-253809181 Lactuca sativa
Lsat_1_v5_gn_8_149100 2.0kb downstream 2.0kb downstream 2717   true Lsat_1_v8_lg_8: 253804465-253807181 Lactuca sativa
Lsat_1_v5_gn_8_149100 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 253804465-253806464 Lactuca sativa
Lsat_1_v5_gn_8_149100 5.0kb upstream 5.0kb upstream 5717   true Lsat_1_v8_lg_8: 253806465-253812181 Lactuca sativa
Lsat_1_v5_gn_8_149100 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 253807182-253812181 Lactuca sativa
Lsat_1_v5_gn_8_149100 5.0kb downstream 5.0kb downstream 5717   true Lsat_1_v8_lg_8: 253801465-253807181 Lactuca sativa
Lsat_1_v5_gn_8_149100 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 253801465-253806464 Lactuca sativa
Lsat_1_v5_gn_8_149100 10.0kb upstream 10.0kb upstream 10717   true Lsat_1_v8_lg_8: 253806465-253817181 Lactuca sativa
Lsat_1_v5_gn_8_149100 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 253807182-253817181 Lactuca sativa
Lsat_1_v5_gn_8_149100 10.0kb downstream 10.0kb downstream 10717   true Lsat_1_v8_lg_8: 253796465-253807181 Lactuca sativa
Lsat_1_v5_gn_8_149100 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 253796465-253806464 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475256 5263 Asterids View MSA
123742900 5271 Pentapetalae View MSA
122770434 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain