Gene : Lsat_1_v5_gn_8_1500 L. sativa V8
Defline:  (1 of 1) PTHR34056//PTHR34056:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRC8 Genomic Order:  2
Name:  ? Lsat_1_v5_gn_8_1500 Secondary Identifier:  ? PAC:38953163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_1500 0.5kb upstream 0.5kb upstream 8844   true Lsat_1_v8_lg_8: 474181-483024 Lactuca sativa
Lsat_1_v5_gn_8_1500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 482525-483024 Lactuca sativa
Lsat_1_v5_gn_8_1500 0.5kb downstream 0.5kb downstream 8844   true Lsat_1_v8_lg_8: 473681-482524 Lactuca sativa
Lsat_1_v5_gn_8_1500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 473681-474180 Lactuca sativa
Lsat_1_v5_gn_8_1500 1.0kb upstream 1.0kb upstream 9344   true Lsat_1_v8_lg_8: 474181-483524 Lactuca sativa
Lsat_1_v5_gn_8_1500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 482525-483524 Lactuca sativa
Lsat_1_v5_gn_8_1500 1.0kb downstream 1.0kb downstream 9344   true Lsat_1_v8_lg_8: 473181-482524 Lactuca sativa
Lsat_1_v5_gn_8_1500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 473181-474180 Lactuca sativa
Lsat_1_v5_gn_8_1500 2.0kb upstream 2.0kb upstream 10344   true Lsat_1_v8_lg_8: 474181-484524 Lactuca sativa
Lsat_1_v5_gn_8_1500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 482525-484524 Lactuca sativa
Lsat_1_v5_gn_8_1500 2.0kb downstream 2.0kb downstream 10344   true Lsat_1_v8_lg_8: 472181-482524 Lactuca sativa
Lsat_1_v5_gn_8_1500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 472181-474180 Lactuca sativa
Lsat_1_v5_gn_8_1500 5.0kb upstream 5.0kb upstream 13344   true Lsat_1_v8_lg_8: 474181-487524 Lactuca sativa
Lsat_1_v5_gn_8_1500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 482525-487524 Lactuca sativa
Lsat_1_v5_gn_8_1500 5.0kb downstream 5.0kb downstream 13344   true Lsat_1_v8_lg_8: 469181-482524 Lactuca sativa
Lsat_1_v5_gn_8_1500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 469181-474180 Lactuca sativa
Lsat_1_v5_gn_8_1500 10.0kb upstream 10.0kb upstream 18344   true Lsat_1_v8_lg_8: 474181-492524 Lactuca sativa
Lsat_1_v5_gn_8_1500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 482525-492524 Lactuca sativa
Lsat_1_v5_gn_8_1500 10.0kb downstream 10.0kb downstream 18344   true Lsat_1_v8_lg_8: 464181-482524 Lactuca sativa
Lsat_1_v5_gn_8_1500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 464181-474180 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473962 5263 Asterids View MSA
123740304 5271 Pentapetalae View MSA
122789532 5272 Eudicot View MSA
122043438 5273 Angiosperm View MSA
121310125 5274 Embryophyte View MSA
123347699 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain