Gene : Lsat_1_v5_gn_8_151280 L. sativa V8
Defline:  (1 of 3) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  4471
Name:  ? Lsat_1_v5_gn_8_151280 Secondary Identifier:  ? PAC:38952948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_151280 0.5kb upstream 0.5kb upstream 1853   true Lsat_1_v8_lg_8: 257394534-257396386 Lactuca sativa
Lsat_1_v5_gn_8_151280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 257395887-257396386 Lactuca sativa
Lsat_1_v5_gn_8_151280 0.5kb downstream 0.5kb downstream 1853   true Lsat_1_v8_lg_8: 257394034-257395886 Lactuca sativa
Lsat_1_v5_gn_8_151280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 257394034-257394533 Lactuca sativa
Lsat_1_v5_gn_8_151280 1.0kb upstream 1.0kb upstream 2353   true Lsat_1_v8_lg_8: 257394534-257396886 Lactuca sativa
Lsat_1_v5_gn_8_151280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 257395887-257396886 Lactuca sativa
Lsat_1_v5_gn_8_151280 1.0kb downstream 1.0kb downstream 2353   true Lsat_1_v8_lg_8: 257393534-257395886 Lactuca sativa
Lsat_1_v5_gn_8_151280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 257393534-257394533 Lactuca sativa
Lsat_1_v5_gn_8_151280 2.0kb upstream 2.0kb upstream 3353   true Lsat_1_v8_lg_8: 257394534-257397886 Lactuca sativa
Lsat_1_v5_gn_8_151280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 257395887-257397886 Lactuca sativa
Lsat_1_v5_gn_8_151280 2.0kb downstream 2.0kb downstream 3353   true Lsat_1_v8_lg_8: 257392534-257395886 Lactuca sativa
Lsat_1_v5_gn_8_151280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 257392534-257394533 Lactuca sativa
Lsat_1_v5_gn_8_151280 5.0kb upstream 5.0kb upstream 6353   true Lsat_1_v8_lg_8: 257394534-257400886 Lactuca sativa
Lsat_1_v5_gn_8_151280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 257395887-257400886 Lactuca sativa
Lsat_1_v5_gn_8_151280 5.0kb downstream 5.0kb downstream 6353   true Lsat_1_v8_lg_8: 257389534-257395886 Lactuca sativa
Lsat_1_v5_gn_8_151280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 257389534-257394533 Lactuca sativa
Lsat_1_v5_gn_8_151280 10.0kb upstream 10.0kb upstream 11353   true Lsat_1_v8_lg_8: 257394534-257405886 Lactuca sativa
Lsat_1_v5_gn_8_151280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 257395887-257405886 Lactuca sativa
Lsat_1_v5_gn_8_151280 10.0kb downstream 10.0kb downstream 11353   true Lsat_1_v8_lg_8: 257384534-257395886 Lactuca sativa
Lsat_1_v5_gn_8_151280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 257384534-257394533 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469726 5263 Asterids View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain