Gene : Lsat_1_v5_gn_8_151760 L. sativa V8
Defline:  (1 of 6) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  4467
Name:  ? Lsat_1_v5_gn_8_151760 Secondary Identifier:  ? PAC:38956096
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa SUCSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_151760 0.5kb upstream 0.5kb upstream 3075   true Lsat_1_v8_lg_8: 256915960-256919034 Lactuca sativa
Lsat_1_v5_gn_8_151760 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 256918535-256919034 Lactuca sativa
Lsat_1_v5_gn_8_151760 0.5kb downstream 0.5kb downstream 3075   true Lsat_1_v8_lg_8: 256915460-256918534 Lactuca sativa
Lsat_1_v5_gn_8_151760 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 256915460-256915959 Lactuca sativa
Lsat_1_v5_gn_8_151760 1.0kb upstream 1.0kb upstream 3575   true Lsat_1_v8_lg_8: 256915960-256919534 Lactuca sativa
Lsat_1_v5_gn_8_151760 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 256918535-256919534 Lactuca sativa
Lsat_1_v5_gn_8_151760 1.0kb downstream 1.0kb downstream 3575   true Lsat_1_v8_lg_8: 256914960-256918534 Lactuca sativa
Lsat_1_v5_gn_8_151760 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 256914960-256915959 Lactuca sativa
Lsat_1_v5_gn_8_151760 2.0kb upstream 2.0kb upstream 4575   true Lsat_1_v8_lg_8: 256915960-256920534 Lactuca sativa
Lsat_1_v5_gn_8_151760 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 256918535-256920534 Lactuca sativa
Lsat_1_v5_gn_8_151760 2.0kb downstream 2.0kb downstream 4575   true Lsat_1_v8_lg_8: 256913960-256918534 Lactuca sativa
Lsat_1_v5_gn_8_151760 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 256913960-256915959 Lactuca sativa
Lsat_1_v5_gn_8_151760 5.0kb upstream 5.0kb upstream 7575   true Lsat_1_v8_lg_8: 256915960-256923534 Lactuca sativa
Lsat_1_v5_gn_8_151760 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 256918535-256923534 Lactuca sativa
Lsat_1_v5_gn_8_151760 5.0kb downstream 5.0kb downstream 7575   true Lsat_1_v8_lg_8: 256910960-256918534 Lactuca sativa
Lsat_1_v5_gn_8_151760 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 256910960-256915959 Lactuca sativa
Lsat_1_v5_gn_8_151760 10.0kb upstream 10.0kb upstream 12575   true Lsat_1_v8_lg_8: 256915960-256928534 Lactuca sativa
Lsat_1_v5_gn_8_151760 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 256918535-256928534 Lactuca sativa
Lsat_1_v5_gn_8_151760 10.0kb downstream 10.0kb downstream 12575   true Lsat_1_v8_lg_8: 256905960-256918534 Lactuca sativa
Lsat_1_v5_gn_8_151760 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 256905960-256915959 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478699 5263 Asterids View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain