Gene : Lsat_1_v5_gn_8_156180 L. sativa V8
Defline:  (1 of 1) PTHR31458//PTHR31458:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  4624
Name:  ? Lsat_1_v5_gn_8_156180 Secondary Identifier:  ? PAC:38951006
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_156180 0.5kb upstream 0.5kb upstream 2777   true Lsat_1_v8_lg_8: 271629174-271631950 Lactuca sativa
Lsat_1_v5_gn_8_156180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 271629174-271629673 Lactuca sativa
Lsat_1_v5_gn_8_156180 0.5kb downstream 0.5kb downstream 2777   true Lsat_1_v8_lg_8: 271629674-271632450 Lactuca sativa
Lsat_1_v5_gn_8_156180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 271631951-271632450 Lactuca sativa
Lsat_1_v5_gn_8_156180 1.0kb upstream 1.0kb upstream 3277   true Lsat_1_v8_lg_8: 271628674-271631950 Lactuca sativa
Lsat_1_v5_gn_8_156180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 271628674-271629673 Lactuca sativa
Lsat_1_v5_gn_8_156180 1.0kb downstream 1.0kb downstream 3277   true Lsat_1_v8_lg_8: 271629674-271632950 Lactuca sativa
Lsat_1_v5_gn_8_156180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 271631951-271632950 Lactuca sativa
Lsat_1_v5_gn_8_156180 2.0kb upstream 2.0kb upstream 4277   true Lsat_1_v8_lg_8: 271627674-271631950 Lactuca sativa
Lsat_1_v5_gn_8_156180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 271627674-271629673 Lactuca sativa
Lsat_1_v5_gn_8_156180 2.0kb downstream 2.0kb downstream 4277   true Lsat_1_v8_lg_8: 271629674-271633950 Lactuca sativa
Lsat_1_v5_gn_8_156180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 271631951-271633950 Lactuca sativa
Lsat_1_v5_gn_8_156180 5.0kb upstream 5.0kb upstream 7277   true Lsat_1_v8_lg_8: 271624674-271631950 Lactuca sativa
Lsat_1_v5_gn_8_156180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 271624674-271629673 Lactuca sativa
Lsat_1_v5_gn_8_156180 5.0kb downstream 5.0kb downstream 7277   true Lsat_1_v8_lg_8: 271629674-271636950 Lactuca sativa
Lsat_1_v5_gn_8_156180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 271631951-271636950 Lactuca sativa
Lsat_1_v5_gn_8_156180 10.0kb upstream 10.0kb upstream 12277   true Lsat_1_v8_lg_8: 271619674-271631950 Lactuca sativa
Lsat_1_v5_gn_8_156180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 271619674-271629673 Lactuca sativa
Lsat_1_v5_gn_8_156180 10.0kb downstream 10.0kb downstream 12277   true Lsat_1_v8_lg_8: 271629674-271641950 Lactuca sativa
Lsat_1_v5_gn_8_156180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 271631951-271641950 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473354 5263 Asterids View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain