Gene : Lsat_1_v5_gn_8_155280 L. sativa V8
Defline:  (1 of 3) PTHR31375//PTHR31375:SF29 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN-RELATED Genomic Order:  4590
Name:  ? Lsat_1_v5_gn_8_155280 Secondary Identifier:  ? PAC:38953945
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-1081 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_155280 0.5kb upstream 0.5kb upstream 5607   true Lsat_1_v8_lg_8: 268814314-268819920 Lactuca sativa
Lsat_1_v5_gn_8_155280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 268819421-268819920 Lactuca sativa
Lsat_1_v5_gn_8_155280 0.5kb downstream 0.5kb downstream 5607   true Lsat_1_v8_lg_8: 268813814-268819420 Lactuca sativa
Lsat_1_v5_gn_8_155280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 268813814-268814313 Lactuca sativa
Lsat_1_v5_gn_8_155280 1.0kb upstream 1.0kb upstream 6107   true Lsat_1_v8_lg_8: 268814314-268820420 Lactuca sativa
Lsat_1_v5_gn_8_155280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 268819421-268820420 Lactuca sativa
Lsat_1_v5_gn_8_155280 1.0kb downstream 1.0kb downstream 6107   true Lsat_1_v8_lg_8: 268813314-268819420 Lactuca sativa
Lsat_1_v5_gn_8_155280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 268813314-268814313 Lactuca sativa
Lsat_1_v5_gn_8_155280 2.0kb upstream 2.0kb upstream 7107   true Lsat_1_v8_lg_8: 268814314-268821420 Lactuca sativa
Lsat_1_v5_gn_8_155280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 268819421-268821420 Lactuca sativa
Lsat_1_v5_gn_8_155280 2.0kb downstream 2.0kb downstream 7107   true Lsat_1_v8_lg_8: 268812314-268819420 Lactuca sativa
Lsat_1_v5_gn_8_155280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 268812314-268814313 Lactuca sativa
Lsat_1_v5_gn_8_155280 5.0kb upstream 5.0kb upstream 10107   true Lsat_1_v8_lg_8: 268814314-268824420 Lactuca sativa
Lsat_1_v5_gn_8_155280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 268819421-268824420 Lactuca sativa
Lsat_1_v5_gn_8_155280 5.0kb downstream 5.0kb downstream 10107   true Lsat_1_v8_lg_8: 268809314-268819420 Lactuca sativa
Lsat_1_v5_gn_8_155280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 268809314-268814313 Lactuca sativa
Lsat_1_v5_gn_8_155280 10.0kb upstream 10.0kb upstream 15107   true Lsat_1_v8_lg_8: 268814314-268829420 Lactuca sativa
Lsat_1_v5_gn_8_155280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 268819421-268829420 Lactuca sativa
Lsat_1_v5_gn_8_155280 10.0kb downstream 10.0kb downstream 15107   true Lsat_1_v8_lg_8: 268804314-268819420 Lactuca sativa
Lsat_1_v5_gn_8_155280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 268804314-268814313 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466513 5263 Asterids View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain