Gene : Lsat_1_v5_gn_8_111501 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3439
Name:  ? Lsat_1_v5_gn_8_111501 Secondary Identifier:  ? PAC:38950529
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_111501 0.5kb upstream 0.5kb upstream 2502   true Lsat_1_v8_lg_8: 170788724-170791225 Lactuca sativa
Lsat_1_v5_gn_8_111501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 170788724-170789223 Lactuca sativa
Lsat_1_v5_gn_8_111501 0.5kb downstream 0.5kb downstream 2502   true Lsat_1_v8_lg_8: 170789224-170791725 Lactuca sativa
Lsat_1_v5_gn_8_111501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 170791226-170791725 Lactuca sativa
Lsat_1_v5_gn_8_111501 1.0kb upstream 1.0kb upstream 3002   true Lsat_1_v8_lg_8: 170788224-170791225 Lactuca sativa
Lsat_1_v5_gn_8_111501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 170788224-170789223 Lactuca sativa
Lsat_1_v5_gn_8_111501 1.0kb downstream 1.0kb downstream 3002   true Lsat_1_v8_lg_8: 170789224-170792225 Lactuca sativa
Lsat_1_v5_gn_8_111501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 170791226-170792225 Lactuca sativa
Lsat_1_v5_gn_8_111501 2.0kb upstream 2.0kb upstream 4002   true Lsat_1_v8_lg_8: 170787224-170791225 Lactuca sativa
Lsat_1_v5_gn_8_111501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 170787224-170789223 Lactuca sativa
Lsat_1_v5_gn_8_111501 2.0kb downstream 2.0kb downstream 4002   true Lsat_1_v8_lg_8: 170789224-170793225 Lactuca sativa
Lsat_1_v5_gn_8_111501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 170791226-170793225 Lactuca sativa
Lsat_1_v5_gn_8_111501 5.0kb upstream 5.0kb upstream 7002   true Lsat_1_v8_lg_8: 170784224-170791225 Lactuca sativa
Lsat_1_v5_gn_8_111501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 170784224-170789223 Lactuca sativa
Lsat_1_v5_gn_8_111501 5.0kb downstream 5.0kb downstream 7002   true Lsat_1_v8_lg_8: 170789224-170796225 Lactuca sativa
Lsat_1_v5_gn_8_111501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 170791226-170796225 Lactuca sativa
Lsat_1_v5_gn_8_111501 10.0kb upstream 10.0kb upstream 12002   true Lsat_1_v8_lg_8: 170779224-170791225 Lactuca sativa
Lsat_1_v5_gn_8_111501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 170779224-170789223 Lactuca sativa
Lsat_1_v5_gn_8_111501 10.0kb downstream 10.0kb downstream 12002   true Lsat_1_v8_lg_8: 170789224-170801225 Lactuca sativa
Lsat_1_v5_gn_8_111501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 170791226-170801225 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473839 5263 Asterids View MSA
123744781 5271 Pentapetalae View MSA
122795456 5272 Eudicot View MSA
122048735 5273 Angiosperm View MSA
121311088 5274 Embryophyte View MSA
123348435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain