Gene : Lsat_1_v5_gn_8_112321 L. sativa V8
Defline:  (1 of 5) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  3470
Name:  ? Lsat_1_v5_gn_8_112321 Secondary Identifier:  ? PAC:38956464
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6368 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_112321 0.5kb upstream 0.5kb upstream 6367   true Lsat_1_v8_lg_8: 172072854-172079220 Lactuca sativa
Lsat_1_v5_gn_8_112321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 172072854-172073353 Lactuca sativa
Lsat_1_v5_gn_8_112321 0.5kb downstream 0.5kb downstream 6367   true Lsat_1_v8_lg_8: 172073354-172079720 Lactuca sativa
Lsat_1_v5_gn_8_112321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 172079221-172079720 Lactuca sativa
Lsat_1_v5_gn_8_112321 1.0kb upstream 1.0kb upstream 6867   true Lsat_1_v8_lg_8: 172072354-172079220 Lactuca sativa
Lsat_1_v5_gn_8_112321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 172072354-172073353 Lactuca sativa
Lsat_1_v5_gn_8_112321 1.0kb downstream 1.0kb downstream 6867   true Lsat_1_v8_lg_8: 172073354-172080220 Lactuca sativa
Lsat_1_v5_gn_8_112321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 172079221-172080220 Lactuca sativa
Lsat_1_v5_gn_8_112321 2.0kb upstream 2.0kb upstream 7867   true Lsat_1_v8_lg_8: 172071354-172079220 Lactuca sativa
Lsat_1_v5_gn_8_112321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 172071354-172073353 Lactuca sativa
Lsat_1_v5_gn_8_112321 2.0kb downstream 2.0kb downstream 7867   true Lsat_1_v8_lg_8: 172073354-172081220 Lactuca sativa
Lsat_1_v5_gn_8_112321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 172079221-172081220 Lactuca sativa
Lsat_1_v5_gn_8_112321 5.0kb upstream 5.0kb upstream 10867   true Lsat_1_v8_lg_8: 172068354-172079220 Lactuca sativa
Lsat_1_v5_gn_8_112321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 172068354-172073353 Lactuca sativa
Lsat_1_v5_gn_8_112321 5.0kb downstream 5.0kb downstream 10867   true Lsat_1_v8_lg_8: 172073354-172084220 Lactuca sativa
Lsat_1_v5_gn_8_112321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 172079221-172084220 Lactuca sativa
Lsat_1_v5_gn_8_112321 10.0kb upstream 10.0kb upstream 15867   true Lsat_1_v8_lg_8: 172063354-172079220 Lactuca sativa
Lsat_1_v5_gn_8_112321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 172063354-172073353 Lactuca sativa
Lsat_1_v5_gn_8_112321 10.0kb downstream 10.0kb downstream 15867   true Lsat_1_v8_lg_8: 172073354-172089220 Lactuca sativa
Lsat_1_v5_gn_8_112321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 172079221-172089220 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469504 5263 Asterids View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain