Gene : Lsat_1_v5_gn_8_114040 L. sativa V8
Defline:  (1 of 1) KOG0640 - mRNA cleavage stimulating factor complex; subunit 1 Genomic Order:  3505
Name:  ? Lsat_1_v5_gn_8_114040 Secondary Identifier:  ? PAC:38956035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_114040 0.5kb upstream 0.5kb upstream 4998   true Lsat_1_v8_lg_8: 174335353-174340350 Lactuca sativa
Lsat_1_v5_gn_8_114040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 174335353-174335852 Lactuca sativa
Lsat_1_v5_gn_8_114040 0.5kb downstream 0.5kb downstream 4998   true Lsat_1_v8_lg_8: 174335853-174340850 Lactuca sativa
Lsat_1_v5_gn_8_114040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 174340351-174340850 Lactuca sativa
Lsat_1_v5_gn_8_114040 1.0kb upstream 1.0kb upstream 5498   true Lsat_1_v8_lg_8: 174334853-174340350 Lactuca sativa
Lsat_1_v5_gn_8_114040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 174334853-174335852 Lactuca sativa
Lsat_1_v5_gn_8_114040 1.0kb downstream 1.0kb downstream 5498   true Lsat_1_v8_lg_8: 174335853-174341350 Lactuca sativa
Lsat_1_v5_gn_8_114040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 174340351-174341350 Lactuca sativa
Lsat_1_v5_gn_8_114040 2.0kb upstream 2.0kb upstream 6498   true Lsat_1_v8_lg_8: 174333853-174340350 Lactuca sativa
Lsat_1_v5_gn_8_114040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 174333853-174335852 Lactuca sativa
Lsat_1_v5_gn_8_114040 2.0kb downstream 2.0kb downstream 6498   true Lsat_1_v8_lg_8: 174335853-174342350 Lactuca sativa
Lsat_1_v5_gn_8_114040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 174340351-174342350 Lactuca sativa
Lsat_1_v5_gn_8_114040 5.0kb upstream 5.0kb upstream 9498   true Lsat_1_v8_lg_8: 174330853-174340350 Lactuca sativa
Lsat_1_v5_gn_8_114040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 174330853-174335852 Lactuca sativa
Lsat_1_v5_gn_8_114040 5.0kb downstream 5.0kb downstream 9498   true Lsat_1_v8_lg_8: 174335853-174345350 Lactuca sativa
Lsat_1_v5_gn_8_114040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 174340351-174345350 Lactuca sativa
Lsat_1_v5_gn_8_114040 10.0kb upstream 10.0kb upstream 14498   true Lsat_1_v8_lg_8: 174325853-174340350 Lactuca sativa
Lsat_1_v5_gn_8_114040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 174325853-174335852 Lactuca sativa
Lsat_1_v5_gn_8_114040 10.0kb downstream 10.0kb downstream 14498   true Lsat_1_v8_lg_8: 174335853-174350350 Lactuca sativa
Lsat_1_v5_gn_8_114040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 174340351-174350350 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026331 5273 Angiosperm View MSA
121474692 5263 Asterids View MSA
123748270 5271 Pentapetalae View MSA
122796771 5272 Eudicot View MSA
121345084 5274 Embryophyte View MSA
123424015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain