Gene : Lsat_1_v5_gn_8_120300 L. sativa V8
Defline:  (1 of 2) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  3698
Name:  ? Lsat_1_v5_gn_8_120300 Secondary Identifier:  ? PAC:38954264
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_120300 0.5kb upstream 0.5kb upstream 2919   true Lsat_1_v8_lg_8: 186583681-186586599 Lactuca sativa
Lsat_1_v5_gn_8_120300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 186586100-186586599 Lactuca sativa
Lsat_1_v5_gn_8_120300 0.5kb downstream 0.5kb downstream 2919   true Lsat_1_v8_lg_8: 186583181-186586099 Lactuca sativa
Lsat_1_v5_gn_8_120300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 186583181-186583680 Lactuca sativa
Lsat_1_v5_gn_8_120300 1.0kb upstream 1.0kb upstream 3419   true Lsat_1_v8_lg_8: 186583681-186587099 Lactuca sativa
Lsat_1_v5_gn_8_120300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 186586100-186587099 Lactuca sativa
Lsat_1_v5_gn_8_120300 1.0kb downstream 1.0kb downstream 3419   true Lsat_1_v8_lg_8: 186582681-186586099 Lactuca sativa
Lsat_1_v5_gn_8_120300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 186582681-186583680 Lactuca sativa
Lsat_1_v5_gn_8_120300 2.0kb upstream 2.0kb upstream 4419   true Lsat_1_v8_lg_8: 186583681-186588099 Lactuca sativa
Lsat_1_v5_gn_8_120300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 186586100-186588099 Lactuca sativa
Lsat_1_v5_gn_8_120300 2.0kb downstream 2.0kb downstream 4419   true Lsat_1_v8_lg_8: 186581681-186586099 Lactuca sativa
Lsat_1_v5_gn_8_120300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 186581681-186583680 Lactuca sativa
Lsat_1_v5_gn_8_120300 5.0kb upstream 5.0kb upstream 7419   true Lsat_1_v8_lg_8: 186583681-186591099 Lactuca sativa
Lsat_1_v5_gn_8_120300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 186586100-186591099 Lactuca sativa
Lsat_1_v5_gn_8_120300 5.0kb downstream 5.0kb downstream 7419   true Lsat_1_v8_lg_8: 186578681-186586099 Lactuca sativa
Lsat_1_v5_gn_8_120300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 186578681-186583680 Lactuca sativa
Lsat_1_v5_gn_8_120300 10.0kb upstream 10.0kb upstream 12419   true Lsat_1_v8_lg_8: 186583681-186596099 Lactuca sativa
Lsat_1_v5_gn_8_120300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 186586100-186596099 Lactuca sativa
Lsat_1_v5_gn_8_120300 10.0kb downstream 10.0kb downstream 12419   true Lsat_1_v8_lg_8: 186573681-186586099 Lactuca sativa
Lsat_1_v5_gn_8_120300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 186573681-186583680 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
121473902 5263 Asterids View MSA
123740270 5271 Pentapetalae View MSA
122790310 5272 Eudicot View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain