Gene : Lsat_1_v5_gn_8_120421 L. sativa V8
Defline:  (1 of 1) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED Genomic Order:  3692
Name:  ? Lsat_1_v5_gn_8_120421 Secondary Identifier:  ? PAC:38952920
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_120421 0.5kb upstream 0.5kb upstream 3565   true Lsat_1_v8_lg_8: 186440492-186444056 Lactuca sativa
Lsat_1_v5_gn_8_120421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 186440492-186440991 Lactuca sativa
Lsat_1_v5_gn_8_120421 0.5kb downstream 0.5kb downstream 3565   true Lsat_1_v8_lg_8: 186440992-186444556 Lactuca sativa
Lsat_1_v5_gn_8_120421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 186444057-186444556 Lactuca sativa
Lsat_1_v5_gn_8_120421 1.0kb upstream 1.0kb upstream 4065   true Lsat_1_v8_lg_8: 186439992-186444056 Lactuca sativa
Lsat_1_v5_gn_8_120421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 186439992-186440991 Lactuca sativa
Lsat_1_v5_gn_8_120421 1.0kb downstream 1.0kb downstream 4065   true Lsat_1_v8_lg_8: 186440992-186445056 Lactuca sativa
Lsat_1_v5_gn_8_120421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 186444057-186445056 Lactuca sativa
Lsat_1_v5_gn_8_120421 2.0kb upstream 2.0kb upstream 5065   true Lsat_1_v8_lg_8: 186438992-186444056 Lactuca sativa
Lsat_1_v5_gn_8_120421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 186438992-186440991 Lactuca sativa
Lsat_1_v5_gn_8_120421 2.0kb downstream 2.0kb downstream 5065   true Lsat_1_v8_lg_8: 186440992-186446056 Lactuca sativa
Lsat_1_v5_gn_8_120421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 186444057-186446056 Lactuca sativa
Lsat_1_v5_gn_8_120421 5.0kb upstream 5.0kb upstream 8065   true Lsat_1_v8_lg_8: 186435992-186444056 Lactuca sativa
Lsat_1_v5_gn_8_120421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 186435992-186440991 Lactuca sativa
Lsat_1_v5_gn_8_120421 5.0kb downstream 5.0kb downstream 8065   true Lsat_1_v8_lg_8: 186440992-186449056 Lactuca sativa
Lsat_1_v5_gn_8_120421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 186444057-186449056 Lactuca sativa
Lsat_1_v5_gn_8_120421 10.0kb upstream 10.0kb upstream 13065   true Lsat_1_v8_lg_8: 186430992-186444056 Lactuca sativa
Lsat_1_v5_gn_8_120421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 186430992-186440991 Lactuca sativa
Lsat_1_v5_gn_8_120421 10.0kb downstream 10.0kb downstream 13065   true Lsat_1_v8_lg_8: 186440992-186454056 Lactuca sativa
Lsat_1_v5_gn_8_120421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 186444057-186454056 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026886 5273 Angiosperm View MSA
121468490 5263 Asterids View MSA
123742343 5271 Pentapetalae View MSA
122770269 5272 Eudicot View MSA
121348180 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain