Gene : Lsat_1_v5_gn_8_12161 L. sativa V8
Defline:  (1 of 1) PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 Genomic Order:  467
Name:  ? Lsat_1_v5_gn_8_12161 Secondary Identifier:  ? PAC:38955501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_12161 0.5kb upstream 0.5kb upstream 905   true Lsat_1_v8_lg_8: 17370944-17371848 Lactuca sativa
Lsat_1_v5_gn_8_12161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 17371349-17371848 Lactuca sativa
Lsat_1_v5_gn_8_12161 0.5kb downstream 0.5kb downstream 905   true Lsat_1_v8_lg_8: 17370444-17371348 Lactuca sativa
Lsat_1_v5_gn_8_12161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 17370444-17370943 Lactuca sativa
Lsat_1_v5_gn_8_12161 1.0kb upstream 1.0kb upstream 1405   true Lsat_1_v8_lg_8: 17370944-17372348 Lactuca sativa
Lsat_1_v5_gn_8_12161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 17371349-17372348 Lactuca sativa
Lsat_1_v5_gn_8_12161 1.0kb downstream 1.0kb downstream 1405   true Lsat_1_v8_lg_8: 17369944-17371348 Lactuca sativa
Lsat_1_v5_gn_8_12161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 17369944-17370943 Lactuca sativa
Lsat_1_v5_gn_8_12161 2.0kb upstream 2.0kb upstream 2405   true Lsat_1_v8_lg_8: 17370944-17373348 Lactuca sativa
Lsat_1_v5_gn_8_12161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 17371349-17373348 Lactuca sativa
Lsat_1_v5_gn_8_12161 2.0kb downstream 2.0kb downstream 2405   true Lsat_1_v8_lg_8: 17368944-17371348 Lactuca sativa
Lsat_1_v5_gn_8_12161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 17368944-17370943 Lactuca sativa
Lsat_1_v5_gn_8_12161 5.0kb upstream 5.0kb upstream 5405   true Lsat_1_v8_lg_8: 17370944-17376348 Lactuca sativa
Lsat_1_v5_gn_8_12161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 17371349-17376348 Lactuca sativa
Lsat_1_v5_gn_8_12161 5.0kb downstream 5.0kb downstream 5405   true Lsat_1_v8_lg_8: 17365944-17371348 Lactuca sativa
Lsat_1_v5_gn_8_12161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 17365944-17370943 Lactuca sativa
Lsat_1_v5_gn_8_12161 10.0kb upstream 10.0kb upstream 10405   true Lsat_1_v8_lg_8: 17370944-17381348 Lactuca sativa
Lsat_1_v5_gn_8_12161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 17371349-17381348 Lactuca sativa
Lsat_1_v5_gn_8_12161 10.0kb downstream 10.0kb downstream 10405   true Lsat_1_v8_lg_8: 17360944-17371348 Lactuca sativa
Lsat_1_v5_gn_8_12161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 17360944-17370943 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481066 5263 Asterids View MSA
123741111 5271 Pentapetalae View MSA
122795202 5272 Eudicot View MSA
122041795 5273 Angiosperm View MSA
121309889 5274 Embryophyte View MSA
123347525 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain