Gene : Lsat_1_v5_gn_8_12460 L. sativa V8
Defline:  (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  479
Name:  ? Lsat_1_v5_gn_8_12460 Secondary Identifier:  ? PAC:38955073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_12460 0.5kb upstream 0.5kb upstream 4364   true Lsat_1_v8_lg_8: 17869599-17873962 Lactuca sativa
Lsat_1_v5_gn_8_12460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 17869599-17870098 Lactuca sativa
Lsat_1_v5_gn_8_12460 0.5kb downstream 0.5kb downstream 4364   true Lsat_1_v8_lg_8: 17870099-17874462 Lactuca sativa
Lsat_1_v5_gn_8_12460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 17873963-17874462 Lactuca sativa
Lsat_1_v5_gn_8_12460 1.0kb upstream 1.0kb upstream 4864   true Lsat_1_v8_lg_8: 17869099-17873962 Lactuca sativa
Lsat_1_v5_gn_8_12460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 17869099-17870098 Lactuca sativa
Lsat_1_v5_gn_8_12460 1.0kb downstream 1.0kb downstream 4864   true Lsat_1_v8_lg_8: 17870099-17874962 Lactuca sativa
Lsat_1_v5_gn_8_12460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 17873963-17874962 Lactuca sativa
Lsat_1_v5_gn_8_12460 2.0kb upstream 2.0kb upstream 5864   true Lsat_1_v8_lg_8: 17868099-17873962 Lactuca sativa
Lsat_1_v5_gn_8_12460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 17868099-17870098 Lactuca sativa
Lsat_1_v5_gn_8_12460 2.0kb downstream 2.0kb downstream 5864   true Lsat_1_v8_lg_8: 17870099-17875962 Lactuca sativa
Lsat_1_v5_gn_8_12460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 17873963-17875962 Lactuca sativa
Lsat_1_v5_gn_8_12460 5.0kb upstream 5.0kb upstream 8864   true Lsat_1_v8_lg_8: 17865099-17873962 Lactuca sativa
Lsat_1_v5_gn_8_12460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 17865099-17870098 Lactuca sativa
Lsat_1_v5_gn_8_12460 5.0kb downstream 5.0kb downstream 8864   true Lsat_1_v8_lg_8: 17870099-17878962 Lactuca sativa
Lsat_1_v5_gn_8_12460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 17873963-17878962 Lactuca sativa
Lsat_1_v5_gn_8_12460 10.0kb upstream 10.0kb upstream 13864   true Lsat_1_v8_lg_8: 17860099-17873962 Lactuca sativa
Lsat_1_v5_gn_8_12460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 17860099-17870098 Lactuca sativa
Lsat_1_v5_gn_8_12460 10.0kb downstream 10.0kb downstream 13864   true Lsat_1_v8_lg_8: 17870099-17883962 Lactuca sativa
Lsat_1_v5_gn_8_12460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 17873963-17883962 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472969 5263 Asterids View MSA
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain