Gene : Lsat_1_v5_gn_8_12380 L. sativa V8
Defline:  (1 of 1) PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  475
Name:  ? Lsat_1_v5_gn_8_12380 Secondary Identifier:  ? PAC:38951501
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5466 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_12380 0.5kb upstream 0.5kb upstream 2785   true Lsat_1_v8_lg_8: 17795533-17798317 Lactuca sativa
Lsat_1_v5_gn_8_12380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 17795533-17796032 Lactuca sativa
Lsat_1_v5_gn_8_12380 0.5kb downstream 0.5kb downstream 2785   true Lsat_1_v8_lg_8: 17796033-17798817 Lactuca sativa
Lsat_1_v5_gn_8_12380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 17798318-17798817 Lactuca sativa
Lsat_1_v5_gn_8_12380 1.0kb upstream 1.0kb upstream 3285   true Lsat_1_v8_lg_8: 17795033-17798317 Lactuca sativa
Lsat_1_v5_gn_8_12380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 17795033-17796032 Lactuca sativa
Lsat_1_v5_gn_8_12380 1.0kb downstream 1.0kb downstream 3285   true Lsat_1_v8_lg_8: 17796033-17799317 Lactuca sativa
Lsat_1_v5_gn_8_12380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 17798318-17799317 Lactuca sativa
Lsat_1_v5_gn_8_12380 2.0kb upstream 2.0kb upstream 4285   true Lsat_1_v8_lg_8: 17794033-17798317 Lactuca sativa
Lsat_1_v5_gn_8_12380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 17794033-17796032 Lactuca sativa
Lsat_1_v5_gn_8_12380 2.0kb downstream 2.0kb downstream 4285   true Lsat_1_v8_lg_8: 17796033-17800317 Lactuca sativa
Lsat_1_v5_gn_8_12380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 17798318-17800317 Lactuca sativa
Lsat_1_v5_gn_8_12380 5.0kb upstream 5.0kb upstream 7285   true Lsat_1_v8_lg_8: 17791033-17798317 Lactuca sativa
Lsat_1_v5_gn_8_12380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 17791033-17796032 Lactuca sativa
Lsat_1_v5_gn_8_12380 5.0kb downstream 5.0kb downstream 7285   true Lsat_1_v8_lg_8: 17796033-17803317 Lactuca sativa
Lsat_1_v5_gn_8_12380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 17798318-17803317 Lactuca sativa
Lsat_1_v5_gn_8_12380 10.0kb upstream 10.0kb upstream 12285   true Lsat_1_v8_lg_8: 17786033-17798317 Lactuca sativa
Lsat_1_v5_gn_8_12380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 17786033-17796032 Lactuca sativa
Lsat_1_v5_gn_8_12380 10.0kb downstream 10.0kb downstream 12285   true Lsat_1_v8_lg_8: 17796033-17808317 Lactuca sativa
Lsat_1_v5_gn_8_12380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 17798318-17808317 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779717 5273 Angiosperm View MSA
121473608 5263 Asterids View MSA
123743966 5271 Pentapetalae View MSA
122770838 5272 Eudicot View MSA
121051361 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain