Gene : Lsat_1_v5_gn_8_131741 L. sativa V8
Defline:  (1 of 1) 2.1.2.5//6.3.3.2 - Glutamate formimidoyltransferase / Glutamate formyltransferase // 5-formyltetrahydrofolate cyclo-ligase / Methenyl-THF synthetase Genomic Order:  3988
Name:  ? Lsat_1_v5_gn_8_131741 Secondary Identifier:  ? PAC:38956198
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_131741 0.5kb upstream 0.5kb upstream 2762   true Lsat_1_v8_lg_8: 208957759-208960520 Lactuca sativa
Lsat_1_v5_gn_8_131741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 208957759-208958258 Lactuca sativa
Lsat_1_v5_gn_8_131741 0.5kb downstream 0.5kb downstream 2762   true Lsat_1_v8_lg_8: 208958259-208961020 Lactuca sativa
Lsat_1_v5_gn_8_131741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 208960521-208961020 Lactuca sativa
Lsat_1_v5_gn_8_131741 1.0kb upstream 1.0kb upstream 3262   true Lsat_1_v8_lg_8: 208957259-208960520 Lactuca sativa
Lsat_1_v5_gn_8_131741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 208957259-208958258 Lactuca sativa
Lsat_1_v5_gn_8_131741 1.0kb downstream 1.0kb downstream 3262   true Lsat_1_v8_lg_8: 208958259-208961520 Lactuca sativa
Lsat_1_v5_gn_8_131741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 208960521-208961520 Lactuca sativa
Lsat_1_v5_gn_8_131741 2.0kb upstream 2.0kb upstream 4262   true Lsat_1_v8_lg_8: 208956259-208960520 Lactuca sativa
Lsat_1_v5_gn_8_131741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 208956259-208958258 Lactuca sativa
Lsat_1_v5_gn_8_131741 2.0kb downstream 2.0kb downstream 4262   true Lsat_1_v8_lg_8: 208958259-208962520 Lactuca sativa
Lsat_1_v5_gn_8_131741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 208960521-208962520 Lactuca sativa
Lsat_1_v5_gn_8_131741 5.0kb upstream 5.0kb upstream 7262   true Lsat_1_v8_lg_8: 208953259-208960520 Lactuca sativa
Lsat_1_v5_gn_8_131741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 208953259-208958258 Lactuca sativa
Lsat_1_v5_gn_8_131741 5.0kb downstream 5.0kb downstream 7262   true Lsat_1_v8_lg_8: 208958259-208965520 Lactuca sativa
Lsat_1_v5_gn_8_131741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 208960521-208965520 Lactuca sativa
Lsat_1_v5_gn_8_131741 10.0kb upstream 10.0kb upstream 12262   true Lsat_1_v8_lg_8: 208948259-208960520 Lactuca sativa
Lsat_1_v5_gn_8_131741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 208948259-208958258 Lactuca sativa
Lsat_1_v5_gn_8_131741 10.0kb downstream 10.0kb downstream 12262   true Lsat_1_v8_lg_8: 208958259-208970520 Lactuca sativa
Lsat_1_v5_gn_8_131741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 208960521-208970520 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466282 5263 Asterids View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain