Gene : Lsat_1_v5_gn_8_26460 L. sativa V8

Defline:  (1 of 1) 1.11.1.21 - Catalase peroxidase Genomic Order:  894
Name:  ? Lsat_1_v5_gn_8_26460 Secondary Identifier:  ? PAC:38952978

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa DETOX1-PWY Lactuca sativa pathologic  
Lsativa DETOX1-PWY-1 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_26460 0.5kb upstream 0.5kb upstream 12283   true Lsat_1_v8_lg_8: 33413827-33426109 Lactuca sativa
Lsat_1_v5_gn_8_26460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 33413827-33414326 Lactuca sativa
Lsat_1_v5_gn_8_26460 0.5kb downstream 0.5kb downstream 12283   true Lsat_1_v8_lg_8: 33414327-33426609 Lactuca sativa
Lsat_1_v5_gn_8_26460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 33426110-33426609 Lactuca sativa
Lsat_1_v5_gn_8_26460 1.0kb upstream 1.0kb upstream 12783   true Lsat_1_v8_lg_8: 33413327-33426109 Lactuca sativa
Lsat_1_v5_gn_8_26460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 33413327-33414326 Lactuca sativa
Lsat_1_v5_gn_8_26460 1.0kb downstream 1.0kb downstream 12783   true Lsat_1_v8_lg_8: 33414327-33427109 Lactuca sativa
Lsat_1_v5_gn_8_26460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 33426110-33427109 Lactuca sativa
Lsat_1_v5_gn_8_26460 2.0kb upstream 2.0kb upstream 13783   true Lsat_1_v8_lg_8: 33412327-33426109 Lactuca sativa
Lsat_1_v5_gn_8_26460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 33412327-33414326 Lactuca sativa
Lsat_1_v5_gn_8_26460 2.0kb downstream 2.0kb downstream 13783   true Lsat_1_v8_lg_8: 33414327-33428109 Lactuca sativa
Lsat_1_v5_gn_8_26460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 33426110-33428109 Lactuca sativa
Lsat_1_v5_gn_8_26460 5.0kb upstream 5.0kb upstream 16783   true Lsat_1_v8_lg_8: 33409327-33426109 Lactuca sativa
Lsat_1_v5_gn_8_26460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 33409327-33414326 Lactuca sativa
Lsat_1_v5_gn_8_26460 5.0kb downstream 5.0kb downstream 16783   true Lsat_1_v8_lg_8: 33414327-33431109 Lactuca sativa
Lsat_1_v5_gn_8_26460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 33426110-33431109 Lactuca sativa
Lsat_1_v5_gn_8_26460 10.0kb upstream 10.0kb upstream 21783   true Lsat_1_v8_lg_8: 33404327-33426109 Lactuca sativa
Lsat_1_v5_gn_8_26460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 33404327-33414326 Lactuca sativa
Lsat_1_v5_gn_8_26460 10.0kb downstream 10.0kb downstream 21783   true Lsat_1_v8_lg_8: 33414327-33436109 Lactuca sativa
Lsat_1_v5_gn_8_26460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 33426110-33436109 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
121480632 5263 Asterids View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain