Gene : Lsat_1_v5_gn_8_28441 L. sativa V8
Defline:  (1 of 2) PTHR33346:SF2 - DEHYDRIN COR47-RELATED Genomic Order:  945
Name:  ? Lsat_1_v5_gn_8_28441 Secondary Identifier:  ? PAC:38953326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_28441 0.5kb upstream 0.5kb upstream 1828   true Lsat_1_v8_lg_8: 35214025-35215852 Lactuca sativa
Lsat_1_v5_gn_8_28441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 35214025-35214524 Lactuca sativa
Lsat_1_v5_gn_8_28441 0.5kb downstream 0.5kb downstream 1828   true Lsat_1_v8_lg_8: 35214525-35216352 Lactuca sativa
Lsat_1_v5_gn_8_28441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 35215853-35216352 Lactuca sativa
Lsat_1_v5_gn_8_28441 1.0kb upstream 1.0kb upstream 2328   true Lsat_1_v8_lg_8: 35213525-35215852 Lactuca sativa
Lsat_1_v5_gn_8_28441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 35213525-35214524 Lactuca sativa
Lsat_1_v5_gn_8_28441 1.0kb downstream 1.0kb downstream 2328   true Lsat_1_v8_lg_8: 35214525-35216852 Lactuca sativa
Lsat_1_v5_gn_8_28441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 35215853-35216852 Lactuca sativa
Lsat_1_v5_gn_8_28441 2.0kb upstream 2.0kb upstream 3328   true Lsat_1_v8_lg_8: 35212525-35215852 Lactuca sativa
Lsat_1_v5_gn_8_28441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 35212525-35214524 Lactuca sativa
Lsat_1_v5_gn_8_28441 2.0kb downstream 2.0kb downstream 3328   true Lsat_1_v8_lg_8: 35214525-35217852 Lactuca sativa
Lsat_1_v5_gn_8_28441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 35215853-35217852 Lactuca sativa
Lsat_1_v5_gn_8_28441 5.0kb upstream 5.0kb upstream 6328   true Lsat_1_v8_lg_8: 35209525-35215852 Lactuca sativa
Lsat_1_v5_gn_8_28441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 35209525-35214524 Lactuca sativa
Lsat_1_v5_gn_8_28441 5.0kb downstream 5.0kb downstream 6328   true Lsat_1_v8_lg_8: 35214525-35220852 Lactuca sativa
Lsat_1_v5_gn_8_28441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 35215853-35220852 Lactuca sativa
Lsat_1_v5_gn_8_28441 10.0kb upstream 10.0kb upstream 11328   true Lsat_1_v8_lg_8: 35204525-35215852 Lactuca sativa
Lsat_1_v5_gn_8_28441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 35204525-35214524 Lactuca sativa
Lsat_1_v5_gn_8_28441 10.0kb downstream 10.0kb downstream 11328   true Lsat_1_v8_lg_8: 35214525-35225852 Lactuca sativa
Lsat_1_v5_gn_8_28441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 35215853-35225852 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121448453 5263 Asterids Singleton cluster - no MSA
123752147 5271 Pentapetalae View MSA
122797627 5272 Eudicot View MSA
122045069 5273 Angiosperm View MSA
121349799 5274 Embryophyte View MSA
123381452 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain