Gene : Lsat_1_v5_gn_8_29680 L. sativa V8
Defline:  (1 of 6) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  1001
Name:  ? Lsat_1_v5_gn_8_29680 Secondary Identifier:  ? PAC:38953176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_29680 0.5kb upstream 0.5kb upstream 2442   true Lsat_1_v8_lg_8: 37217242-37219683 Lactuca sativa
Lsat_1_v5_gn_8_29680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 37217242-37217741 Lactuca sativa
Lsat_1_v5_gn_8_29680 0.5kb downstream 0.5kb downstream 2442   true Lsat_1_v8_lg_8: 37217742-37220183 Lactuca sativa
Lsat_1_v5_gn_8_29680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 37219684-37220183 Lactuca sativa
Lsat_1_v5_gn_8_29680 1.0kb upstream 1.0kb upstream 2942   true Lsat_1_v8_lg_8: 37216742-37219683 Lactuca sativa
Lsat_1_v5_gn_8_29680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 37216742-37217741 Lactuca sativa
Lsat_1_v5_gn_8_29680 1.0kb downstream 1.0kb downstream 2942   true Lsat_1_v8_lg_8: 37217742-37220683 Lactuca sativa
Lsat_1_v5_gn_8_29680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 37219684-37220683 Lactuca sativa
Lsat_1_v5_gn_8_29680 2.0kb upstream 2.0kb upstream 3942   true Lsat_1_v8_lg_8: 37215742-37219683 Lactuca sativa
Lsat_1_v5_gn_8_29680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 37215742-37217741 Lactuca sativa
Lsat_1_v5_gn_8_29680 2.0kb downstream 2.0kb downstream 3942   true Lsat_1_v8_lg_8: 37217742-37221683 Lactuca sativa
Lsat_1_v5_gn_8_29680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 37219684-37221683 Lactuca sativa
Lsat_1_v5_gn_8_29680 5.0kb upstream 5.0kb upstream 6942   true Lsat_1_v8_lg_8: 37212742-37219683 Lactuca sativa
Lsat_1_v5_gn_8_29680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 37212742-37217741 Lactuca sativa
Lsat_1_v5_gn_8_29680 5.0kb downstream 5.0kb downstream 6942   true Lsat_1_v8_lg_8: 37217742-37224683 Lactuca sativa
Lsat_1_v5_gn_8_29680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 37219684-37224683 Lactuca sativa
Lsat_1_v5_gn_8_29680 10.0kb upstream 10.0kb upstream 11942   true Lsat_1_v8_lg_8: 37207742-37219683 Lactuca sativa
Lsat_1_v5_gn_8_29680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 37207742-37217741 Lactuca sativa
Lsat_1_v5_gn_8_29680 10.0kb downstream 10.0kb downstream 11942   true Lsat_1_v8_lg_8: 37217742-37229683 Lactuca sativa
Lsat_1_v5_gn_8_29680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 37219684-37229683 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470266 5263 Asterids View MSA
123752096 5271 Pentapetalae View MSA
122792409 5272 Eudicot View MSA
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain