Gene : Lsat_1_v5_gn_8_3160 L. sativa V8
Defline:  (1 of 2) PTHR31682//PTHR31682:SF4 - FAMILY NOT NAMED // UDP-ARABINOPYRANOSE MUTASE 5-RELATED Genomic Order:  97
Name:  ? Lsat_1_v5_gn_8_3160 Secondary Identifier:  ? PAC:38949443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_3160 0.5kb upstream 0.5kb upstream 2826   true Lsat_1_v8_lg_8: 4212415-4215240 Lactuca sativa
Lsat_1_v5_gn_8_3160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 4212415-4212914 Lactuca sativa
Lsat_1_v5_gn_8_3160 0.5kb downstream 0.5kb downstream 2826   true Lsat_1_v8_lg_8: 4212915-4215740 Lactuca sativa
Lsat_1_v5_gn_8_3160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 4215241-4215740 Lactuca sativa
Lsat_1_v5_gn_8_3160 1.0kb upstream 1.0kb upstream 3326   true Lsat_1_v8_lg_8: 4211915-4215240 Lactuca sativa
Lsat_1_v5_gn_8_3160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 4211915-4212914 Lactuca sativa
Lsat_1_v5_gn_8_3160 1.0kb downstream 1.0kb downstream 3326   true Lsat_1_v8_lg_8: 4212915-4216240 Lactuca sativa
Lsat_1_v5_gn_8_3160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 4215241-4216240 Lactuca sativa
Lsat_1_v5_gn_8_3160 2.0kb upstream 2.0kb upstream 4326   true Lsat_1_v8_lg_8: 4210915-4215240 Lactuca sativa
Lsat_1_v5_gn_8_3160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 4210915-4212914 Lactuca sativa
Lsat_1_v5_gn_8_3160 2.0kb downstream 2.0kb downstream 4326   true Lsat_1_v8_lg_8: 4212915-4217240 Lactuca sativa
Lsat_1_v5_gn_8_3160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 4215241-4217240 Lactuca sativa
Lsat_1_v5_gn_8_3160 5.0kb upstream 5.0kb upstream 7326   true Lsat_1_v8_lg_8: 4207915-4215240 Lactuca sativa
Lsat_1_v5_gn_8_3160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 4207915-4212914 Lactuca sativa
Lsat_1_v5_gn_8_3160 5.0kb downstream 5.0kb downstream 7326   true Lsat_1_v8_lg_8: 4212915-4220240 Lactuca sativa
Lsat_1_v5_gn_8_3160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 4215241-4220240 Lactuca sativa
Lsat_1_v5_gn_8_3160 10.0kb upstream 10.0kb upstream 12326   true Lsat_1_v8_lg_8: 4202915-4215240 Lactuca sativa
Lsat_1_v5_gn_8_3160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 4202915-4212914 Lactuca sativa
Lsat_1_v5_gn_8_3160 10.0kb downstream 10.0kb downstream 12326   true Lsat_1_v8_lg_8: 4212915-4225240 Lactuca sativa
Lsat_1_v5_gn_8_3160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 4215241-4225240 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475652 5263 Asterids View MSA
123736866 5271 Pentapetalae View MSA
122789335 5272 Eudicot View MSA
122046007 5273 Angiosperm View MSA
121310537 5274 Embryophyte View MSA
123347996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain