Gene : Lsat_1_v5_gn_8_32301 L. sativa V8
Defline:  (1 of 1) PTHR12300//PTHR12300:SF27 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN F Genomic Order:  1074
Name:  ? Lsat_1_v5_gn_8_32301 Secondary Identifier:  ? PAC:38956157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_32301 0.5kb upstream 0.5kb upstream 1692   true Lsat_1_v8_lg_8: 42108822-42110513 Lactuca sativa
Lsat_1_v5_gn_8_32301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 42110014-42110513 Lactuca sativa
Lsat_1_v5_gn_8_32301 0.5kb downstream 0.5kb downstream 1692   true Lsat_1_v8_lg_8: 42108322-42110013 Lactuca sativa
Lsat_1_v5_gn_8_32301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 42108322-42108821 Lactuca sativa
Lsat_1_v5_gn_8_32301 1.0kb upstream 1.0kb upstream 2192   true Lsat_1_v8_lg_8: 42108822-42111013 Lactuca sativa
Lsat_1_v5_gn_8_32301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 42110014-42111013 Lactuca sativa
Lsat_1_v5_gn_8_32301 1.0kb downstream 1.0kb downstream 2192   true Lsat_1_v8_lg_8: 42107822-42110013 Lactuca sativa
Lsat_1_v5_gn_8_32301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 42107822-42108821 Lactuca sativa
Lsat_1_v5_gn_8_32301 2.0kb upstream 2.0kb upstream 3192   true Lsat_1_v8_lg_8: 42108822-42112013 Lactuca sativa
Lsat_1_v5_gn_8_32301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 42110014-42112013 Lactuca sativa
Lsat_1_v5_gn_8_32301 2.0kb downstream 2.0kb downstream 3192   true Lsat_1_v8_lg_8: 42106822-42110013 Lactuca sativa
Lsat_1_v5_gn_8_32301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 42106822-42108821 Lactuca sativa
Lsat_1_v5_gn_8_32301 5.0kb upstream 5.0kb upstream 6192   true Lsat_1_v8_lg_8: 42108822-42115013 Lactuca sativa
Lsat_1_v5_gn_8_32301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 42110014-42115013 Lactuca sativa
Lsat_1_v5_gn_8_32301 5.0kb downstream 5.0kb downstream 6192   true Lsat_1_v8_lg_8: 42103822-42110013 Lactuca sativa
Lsat_1_v5_gn_8_32301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 42103822-42108821 Lactuca sativa
Lsat_1_v5_gn_8_32301 10.0kb upstream 10.0kb upstream 11192   true Lsat_1_v8_lg_8: 42108822-42120013 Lactuca sativa
Lsat_1_v5_gn_8_32301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 42110014-42120013 Lactuca sativa
Lsat_1_v5_gn_8_32301 10.0kb downstream 10.0kb downstream 11192   true Lsat_1_v8_lg_8: 42098822-42110013 Lactuca sativa
Lsat_1_v5_gn_8_32301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 42098822-42108821 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466652 5263 Asterids View MSA
123742916 5271 Pentapetalae View MSA
122793296 5272 Eudicot View MSA
122047958 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain