Gene : Lsat_1_v5_gn_8_32820 L. sativa V8
Defline:  (1 of 3) PTHR31142//PTHR31142:SF3 - FAMILY NOT NAMED // PROTEIN TOM THREE HOMOLOG 1-RELATED Genomic Order:  1117
Name:  ? Lsat_1_v5_gn_8_32820 Secondary Identifier:  ? PAC:38953014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_32820 0.5kb upstream 0.5kb upstream 4842   true Lsat_1_v8_lg_8: 43391028-43395869 Lactuca sativa
Lsat_1_v5_gn_8_32820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 43391028-43391527 Lactuca sativa
Lsat_1_v5_gn_8_32820 0.5kb downstream 0.5kb downstream 4842   true Lsat_1_v8_lg_8: 43391528-43396369 Lactuca sativa
Lsat_1_v5_gn_8_32820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 43395870-43396369 Lactuca sativa
Lsat_1_v5_gn_8_32820 1.0kb upstream 1.0kb upstream 5342   true Lsat_1_v8_lg_8: 43390528-43395869 Lactuca sativa
Lsat_1_v5_gn_8_32820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 43390528-43391527 Lactuca sativa
Lsat_1_v5_gn_8_32820 1.0kb downstream 1.0kb downstream 5342   true Lsat_1_v8_lg_8: 43391528-43396869 Lactuca sativa
Lsat_1_v5_gn_8_32820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 43395870-43396869 Lactuca sativa
Lsat_1_v5_gn_8_32820 2.0kb upstream 2.0kb upstream 6342   true Lsat_1_v8_lg_8: 43389528-43395869 Lactuca sativa
Lsat_1_v5_gn_8_32820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 43389528-43391527 Lactuca sativa
Lsat_1_v5_gn_8_32820 2.0kb downstream 2.0kb downstream 6342   true Lsat_1_v8_lg_8: 43391528-43397869 Lactuca sativa
Lsat_1_v5_gn_8_32820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 43395870-43397869 Lactuca sativa
Lsat_1_v5_gn_8_32820 5.0kb upstream 5.0kb upstream 9342   true Lsat_1_v8_lg_8: 43386528-43395869 Lactuca sativa
Lsat_1_v5_gn_8_32820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 43386528-43391527 Lactuca sativa
Lsat_1_v5_gn_8_32820 5.0kb downstream 5.0kb downstream 9342   true Lsat_1_v8_lg_8: 43391528-43400869 Lactuca sativa
Lsat_1_v5_gn_8_32820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 43395870-43400869 Lactuca sativa
Lsat_1_v5_gn_8_32820 10.0kb upstream 10.0kb upstream 14342   true Lsat_1_v8_lg_8: 43381528-43395869 Lactuca sativa
Lsat_1_v5_gn_8_32820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 43381528-43391527 Lactuca sativa
Lsat_1_v5_gn_8_32820 10.0kb downstream 10.0kb downstream 14342   true Lsat_1_v8_lg_8: 43391528-43405869 Lactuca sativa
Lsat_1_v5_gn_8_32820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 43395870-43405869 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467340 5263 Asterids View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain