Gene : Lsat_1_v5_gn_8_33380 L. sativa V8
Defline:  (1 of 2) PTHR10799//PTHR10799:SF777 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // DNA-BINDING PROTEIN-RELATED Genomic Order:  1090
Name:  ? Lsat_1_v5_gn_8_33380 Secondary Identifier:  ? PAC:38949684
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_33380 0.5kb upstream 0.5kb upstream 5676   true Lsat_1_v8_lg_8: 42504841-42510516 Lactuca sativa
Lsat_1_v5_gn_8_33380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 42510017-42510516 Lactuca sativa
Lsat_1_v5_gn_8_33380 0.5kb downstream 0.5kb downstream 5676   true Lsat_1_v8_lg_8: 42504341-42510016 Lactuca sativa
Lsat_1_v5_gn_8_33380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 42504341-42504840 Lactuca sativa
Lsat_1_v5_gn_8_33380 1.0kb upstream 1.0kb upstream 6176   true Lsat_1_v8_lg_8: 42504841-42511016 Lactuca sativa
Lsat_1_v5_gn_8_33380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 42510017-42511016 Lactuca sativa
Lsat_1_v5_gn_8_33380 1.0kb downstream 1.0kb downstream 6176   true Lsat_1_v8_lg_8: 42503841-42510016 Lactuca sativa
Lsat_1_v5_gn_8_33380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 42503841-42504840 Lactuca sativa
Lsat_1_v5_gn_8_33380 2.0kb upstream 2.0kb upstream 7176   true Lsat_1_v8_lg_8: 42504841-42512016 Lactuca sativa
Lsat_1_v5_gn_8_33380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 42510017-42512016 Lactuca sativa
Lsat_1_v5_gn_8_33380 2.0kb downstream 2.0kb downstream 7176   true Lsat_1_v8_lg_8: 42502841-42510016 Lactuca sativa
Lsat_1_v5_gn_8_33380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 42502841-42504840 Lactuca sativa
Lsat_1_v5_gn_8_33380 5.0kb upstream 5.0kb upstream 10176   true Lsat_1_v8_lg_8: 42504841-42515016 Lactuca sativa
Lsat_1_v5_gn_8_33380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 42510017-42515016 Lactuca sativa
Lsat_1_v5_gn_8_33380 5.0kb downstream 5.0kb downstream 10176   true Lsat_1_v8_lg_8: 42499841-42510016 Lactuca sativa
Lsat_1_v5_gn_8_33380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 42499841-42504840 Lactuca sativa
Lsat_1_v5_gn_8_33380 10.0kb upstream 10.0kb upstream 15176   true Lsat_1_v8_lg_8: 42504841-42520016 Lactuca sativa
Lsat_1_v5_gn_8_33380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 42510017-42520016 Lactuca sativa
Lsat_1_v5_gn_8_33380 10.0kb downstream 10.0kb downstream 15176   true Lsat_1_v8_lg_8: 42494841-42510016 Lactuca sativa
Lsat_1_v5_gn_8_33380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 42494841-42504840 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471707 5263 Asterids View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain