Gene : Lsat_1_v5_gn_8_35661 L. sativa V8
Defline:  (1 of 1) PTHR10741//PTHR10741:SF5 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN-ASSOCIATED PROTEIN X Genomic Order:  1202
Name:  ? Lsat_1_v5_gn_8_35661 Secondary Identifier:  ? PAC:38956048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_35661 0.5kb upstream 0.5kb upstream 2469   true Lsat_1_v8_lg_8: 47888811-47891279 Lactuca sativa
Lsat_1_v5_gn_8_35661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 47890780-47891279 Lactuca sativa
Lsat_1_v5_gn_8_35661 0.5kb downstream 0.5kb downstream 2469   true Lsat_1_v8_lg_8: 47888311-47890779 Lactuca sativa
Lsat_1_v5_gn_8_35661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 47888311-47888810 Lactuca sativa
Lsat_1_v5_gn_8_35661 1.0kb upstream 1.0kb upstream 2969   true Lsat_1_v8_lg_8: 47888811-47891779 Lactuca sativa
Lsat_1_v5_gn_8_35661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 47890780-47891779 Lactuca sativa
Lsat_1_v5_gn_8_35661 1.0kb downstream 1.0kb downstream 2969   true Lsat_1_v8_lg_8: 47887811-47890779 Lactuca sativa
Lsat_1_v5_gn_8_35661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 47887811-47888810 Lactuca sativa
Lsat_1_v5_gn_8_35661 2.0kb upstream 2.0kb upstream 3969   true Lsat_1_v8_lg_8: 47888811-47892779 Lactuca sativa
Lsat_1_v5_gn_8_35661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 47890780-47892779 Lactuca sativa
Lsat_1_v5_gn_8_35661 2.0kb downstream 2.0kb downstream 3969   true Lsat_1_v8_lg_8: 47886811-47890779 Lactuca sativa
Lsat_1_v5_gn_8_35661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 47886811-47888810 Lactuca sativa
Lsat_1_v5_gn_8_35661 5.0kb upstream 5.0kb upstream 6969   true Lsat_1_v8_lg_8: 47888811-47895779 Lactuca sativa
Lsat_1_v5_gn_8_35661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 47890780-47895779 Lactuca sativa
Lsat_1_v5_gn_8_35661 5.0kb downstream 5.0kb downstream 6969   true Lsat_1_v8_lg_8: 47883811-47890779 Lactuca sativa
Lsat_1_v5_gn_8_35661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 47883811-47888810 Lactuca sativa
Lsat_1_v5_gn_8_35661 10.0kb upstream 10.0kb upstream 11969   true Lsat_1_v8_lg_8: 47888811-47900779 Lactuca sativa
Lsat_1_v5_gn_8_35661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 47890780-47900779 Lactuca sativa
Lsat_1_v5_gn_8_35661 10.0kb downstream 10.0kb downstream 11969   true Lsat_1_v8_lg_8: 47878811-47890779 Lactuca sativa
Lsat_1_v5_gn_8_35661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 47878811-47888810 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479274 5263 Asterids View MSA
123752005 5271 Pentapetalae View MSA
122788507 5272 Eudicot View MSA
122041771 5273 Angiosperm View MSA
121345786 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain