Gene : Lsat_1_v5_gn_8_37461 L. sativa V8
Defline:  (1 of 1) PF00395 - S-layer homology domain (SLH) Genomic Order:  1250
Name:  ? Lsat_1_v5_gn_8_37461 Secondary Identifier:  ? PAC:38955012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_37461 0.5kb upstream 0.5kb upstream 4159   true Lsat_1_v8_lg_8: 50532612-50536770 Lactuca sativa
Lsat_1_v5_gn_8_37461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 50532612-50533111 Lactuca sativa
Lsat_1_v5_gn_8_37461 0.5kb downstream 0.5kb downstream 4159   true Lsat_1_v8_lg_8: 50533112-50537270 Lactuca sativa
Lsat_1_v5_gn_8_37461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 50536771-50537270 Lactuca sativa
Lsat_1_v5_gn_8_37461 1.0kb upstream 1.0kb upstream 4659   true Lsat_1_v8_lg_8: 50532112-50536770 Lactuca sativa
Lsat_1_v5_gn_8_37461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 50532112-50533111 Lactuca sativa
Lsat_1_v5_gn_8_37461 1.0kb downstream 1.0kb downstream 4659   true Lsat_1_v8_lg_8: 50533112-50537770 Lactuca sativa
Lsat_1_v5_gn_8_37461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 50536771-50537770 Lactuca sativa
Lsat_1_v5_gn_8_37461 2.0kb upstream 2.0kb upstream 5659   true Lsat_1_v8_lg_8: 50531112-50536770 Lactuca sativa
Lsat_1_v5_gn_8_37461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 50531112-50533111 Lactuca sativa
Lsat_1_v5_gn_8_37461 2.0kb downstream 2.0kb downstream 5659   true Lsat_1_v8_lg_8: 50533112-50538770 Lactuca sativa
Lsat_1_v5_gn_8_37461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 50536771-50538770 Lactuca sativa
Lsat_1_v5_gn_8_37461 5.0kb upstream 5.0kb upstream 8659   true Lsat_1_v8_lg_8: 50528112-50536770 Lactuca sativa
Lsat_1_v5_gn_8_37461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 50528112-50533111 Lactuca sativa
Lsat_1_v5_gn_8_37461 5.0kb downstream 5.0kb downstream 8659   true Lsat_1_v8_lg_8: 50533112-50541770 Lactuca sativa
Lsat_1_v5_gn_8_37461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 50536771-50541770 Lactuca sativa
Lsat_1_v5_gn_8_37461 10.0kb upstream 10.0kb upstream 13659   true Lsat_1_v8_lg_8: 50523112-50536770 Lactuca sativa
Lsat_1_v5_gn_8_37461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 50523112-50533111 Lactuca sativa
Lsat_1_v5_gn_8_37461 10.0kb downstream 10.0kb downstream 13659   true Lsat_1_v8_lg_8: 50533112-50546770 Lactuca sativa
Lsat_1_v5_gn_8_37461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 50536771-50546770 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041383 5273 Angiosperm View MSA
121468394 5263 Asterids View MSA
123737499 5271 Pentapetalae View MSA
122793809 5272 Eudicot View MSA
121350545 5274 Embryophyte View MSA
123381784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain