Gene : Lsat_1_v5_gn_8_37441 L. sativa V8
Defline:  (1 of 1) PTHR31342:SF7 - PROTEIN CHUP1, CHLOROPLASTIC Genomic Order:  1251
Name:  ? Lsat_1_v5_gn_8_37441 Secondary Identifier:  ? PAC:38955750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_37441 0.5kb upstream 0.5kb upstream 5215   true Lsat_1_v8_lg_8: 50550654-50555868 Lactuca sativa
Lsat_1_v5_gn_8_37441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 50550654-50551153 Lactuca sativa
Lsat_1_v5_gn_8_37441 0.5kb downstream 0.5kb downstream 5215   true Lsat_1_v8_lg_8: 50551154-50556368 Lactuca sativa
Lsat_1_v5_gn_8_37441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 50555869-50556368 Lactuca sativa
Lsat_1_v5_gn_8_37441 1.0kb upstream 1.0kb upstream 5715   true Lsat_1_v8_lg_8: 50550154-50555868 Lactuca sativa
Lsat_1_v5_gn_8_37441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 50550154-50551153 Lactuca sativa
Lsat_1_v5_gn_8_37441 1.0kb downstream 1.0kb downstream 5715   true Lsat_1_v8_lg_8: 50551154-50556868 Lactuca sativa
Lsat_1_v5_gn_8_37441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 50555869-50556868 Lactuca sativa
Lsat_1_v5_gn_8_37441 2.0kb upstream 2.0kb upstream 6715   true Lsat_1_v8_lg_8: 50549154-50555868 Lactuca sativa
Lsat_1_v5_gn_8_37441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 50549154-50551153 Lactuca sativa
Lsat_1_v5_gn_8_37441 2.0kb downstream 2.0kb downstream 6715   true Lsat_1_v8_lg_8: 50551154-50557868 Lactuca sativa
Lsat_1_v5_gn_8_37441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 50555869-50557868 Lactuca sativa
Lsat_1_v5_gn_8_37441 5.0kb upstream 5.0kb upstream 9715   true Lsat_1_v8_lg_8: 50546154-50555868 Lactuca sativa
Lsat_1_v5_gn_8_37441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 50546154-50551153 Lactuca sativa
Lsat_1_v5_gn_8_37441 5.0kb downstream 5.0kb downstream 9715   true Lsat_1_v8_lg_8: 50551154-50560868 Lactuca sativa
Lsat_1_v5_gn_8_37441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 50555869-50560868 Lactuca sativa
Lsat_1_v5_gn_8_37441 10.0kb upstream 10.0kb upstream 14715   true Lsat_1_v8_lg_8: 50541154-50555868 Lactuca sativa
Lsat_1_v5_gn_8_37441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 50541154-50551153 Lactuca sativa
Lsat_1_v5_gn_8_37441 10.0kb downstream 10.0kb downstream 14715   true Lsat_1_v8_lg_8: 50551154-50565868 Lactuca sativa
Lsat_1_v5_gn_8_37441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 50555869-50565868 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472620 5263 Asterids View MSA
123739628 5271 Pentapetalae View MSA
122790649 5272 Eudicot View MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain