Gene : Lsat_1_v5_gn_8_38801 L. sativa V8
Defline:  (1 of 6) KOG2881 - Predicted membrane protein Genomic Order:  1262
Name:  ? Lsat_1_v5_gn_8_38801 Secondary Identifier:  ? PAC:38951395
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_38801 0.5kb upstream 0.5kb upstream 3526   true Lsat_1_v8_lg_8: 52212632-52216157 Lactuca sativa
Lsat_1_v5_gn_8_38801 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 52215658-52216157 Lactuca sativa
Lsat_1_v5_gn_8_38801 0.5kb downstream 0.5kb downstream 3526   true Lsat_1_v8_lg_8: 52212132-52215657 Lactuca sativa
Lsat_1_v5_gn_8_38801 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 52212132-52212631 Lactuca sativa
Lsat_1_v5_gn_8_38801 1.0kb upstream 1.0kb upstream 4026   true Lsat_1_v8_lg_8: 52212632-52216657 Lactuca sativa
Lsat_1_v5_gn_8_38801 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 52215658-52216657 Lactuca sativa
Lsat_1_v5_gn_8_38801 1.0kb downstream 1.0kb downstream 4026   true Lsat_1_v8_lg_8: 52211632-52215657 Lactuca sativa
Lsat_1_v5_gn_8_38801 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 52211632-52212631 Lactuca sativa
Lsat_1_v5_gn_8_38801 2.0kb upstream 2.0kb upstream 5026   true Lsat_1_v8_lg_8: 52212632-52217657 Lactuca sativa
Lsat_1_v5_gn_8_38801 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 52215658-52217657 Lactuca sativa
Lsat_1_v5_gn_8_38801 2.0kb downstream 2.0kb downstream 5026   true Lsat_1_v8_lg_8: 52210632-52215657 Lactuca sativa
Lsat_1_v5_gn_8_38801 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 52210632-52212631 Lactuca sativa
Lsat_1_v5_gn_8_38801 5.0kb upstream 5.0kb upstream 8026   true Lsat_1_v8_lg_8: 52212632-52220657 Lactuca sativa
Lsat_1_v5_gn_8_38801 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 52215658-52220657 Lactuca sativa
Lsat_1_v5_gn_8_38801 5.0kb downstream 5.0kb downstream 8026   true Lsat_1_v8_lg_8: 52207632-52215657 Lactuca sativa
Lsat_1_v5_gn_8_38801 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 52207632-52212631 Lactuca sativa
Lsat_1_v5_gn_8_38801 10.0kb upstream 10.0kb upstream 13026   true Lsat_1_v8_lg_8: 52212632-52225657 Lactuca sativa
Lsat_1_v5_gn_8_38801 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 52215658-52225657 Lactuca sativa
Lsat_1_v5_gn_8_38801 10.0kb downstream 10.0kb downstream 13026   true Lsat_1_v8_lg_8: 52202632-52215657 Lactuca sativa
Lsat_1_v5_gn_8_38801 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 52202632-52212631 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121448171 5263 Asterids Singleton cluster - no MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain