Gene : Lsat_1_v5_gn_8_40760 L. sativa V8
Defline:  (1 of 2) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  1318
Name:  ? Lsat_1_v5_gn_8_40760 Secondary Identifier:  ? PAC:38954486
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_40760 0.5kb upstream 0.5kb upstream 6761   true Lsat_1_v8_lg_8: 55931885-55938645 Lactuca sativa
Lsat_1_v5_gn_8_40760 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 55938146-55938645 Lactuca sativa
Lsat_1_v5_gn_8_40760 0.5kb downstream 0.5kb downstream 6761   true Lsat_1_v8_lg_8: 55931385-55938145 Lactuca sativa
Lsat_1_v5_gn_8_40760 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 55931385-55931884 Lactuca sativa
Lsat_1_v5_gn_8_40760 1.0kb upstream 1.0kb upstream 7261   true Lsat_1_v8_lg_8: 55931885-55939145 Lactuca sativa
Lsat_1_v5_gn_8_40760 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 55938146-55939145 Lactuca sativa
Lsat_1_v5_gn_8_40760 1.0kb downstream 1.0kb downstream 7261   true Lsat_1_v8_lg_8: 55930885-55938145 Lactuca sativa
Lsat_1_v5_gn_8_40760 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 55930885-55931884 Lactuca sativa
Lsat_1_v5_gn_8_40760 2.0kb upstream 2.0kb upstream 8261   true Lsat_1_v8_lg_8: 55931885-55940145 Lactuca sativa
Lsat_1_v5_gn_8_40760 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 55938146-55940145 Lactuca sativa
Lsat_1_v5_gn_8_40760 2.0kb downstream 2.0kb downstream 8261   true Lsat_1_v8_lg_8: 55929885-55938145 Lactuca sativa
Lsat_1_v5_gn_8_40760 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 55929885-55931884 Lactuca sativa
Lsat_1_v5_gn_8_40760 5.0kb upstream 5.0kb upstream 11261   true Lsat_1_v8_lg_8: 55931885-55943145 Lactuca sativa
Lsat_1_v5_gn_8_40760 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 55938146-55943145 Lactuca sativa
Lsat_1_v5_gn_8_40760 5.0kb downstream 5.0kb downstream 11261   true Lsat_1_v8_lg_8: 55926885-55938145 Lactuca sativa
Lsat_1_v5_gn_8_40760 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 55926885-55931884 Lactuca sativa
Lsat_1_v5_gn_8_40760 10.0kb upstream 10.0kb upstream 16261   true Lsat_1_v8_lg_8: 55931885-55948145 Lactuca sativa
Lsat_1_v5_gn_8_40760 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 55938146-55948145 Lactuca sativa
Lsat_1_v5_gn_8_40760 10.0kb downstream 10.0kb downstream 16261   true Lsat_1_v8_lg_8: 55921885-55938145 Lactuca sativa
Lsat_1_v5_gn_8_40760 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 55921885-55931884 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472989 5263 Asterids View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain