Gene : Lsat_1_v5_gn_8_3980 L. sativa V8
Defline:  (1 of 17) PF04844 - Transcriptional repressor, ovate (Ovate) Genomic Order:  134
Name:  ? Lsat_1_v5_gn_8_3980 Secondary Identifier:  ? PAC:38950633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_3980 0.5kb upstream 0.5kb upstream 821   true Lsat_1_v8_lg_8: 5245597-5246417 Lactuca sativa
Lsat_1_v5_gn_8_3980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 5245918-5246417 Lactuca sativa
Lsat_1_v5_gn_8_3980 0.5kb downstream 0.5kb downstream 821   true Lsat_1_v8_lg_8: 5245097-5245917 Lactuca sativa
Lsat_1_v5_gn_8_3980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 5245097-5245596 Lactuca sativa
Lsat_1_v5_gn_8_3980 1.0kb upstream 1.0kb upstream 1321   true Lsat_1_v8_lg_8: 5245597-5246917 Lactuca sativa
Lsat_1_v5_gn_8_3980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 5245918-5246917 Lactuca sativa
Lsat_1_v5_gn_8_3980 1.0kb downstream 1.0kb downstream 1321   true Lsat_1_v8_lg_8: 5244597-5245917 Lactuca sativa
Lsat_1_v5_gn_8_3980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 5244597-5245596 Lactuca sativa
Lsat_1_v5_gn_8_3980 2.0kb upstream 2.0kb upstream 2321   true Lsat_1_v8_lg_8: 5245597-5247917 Lactuca sativa
Lsat_1_v5_gn_8_3980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 5245918-5247917 Lactuca sativa
Lsat_1_v5_gn_8_3980 2.0kb downstream 2.0kb downstream 2321   true Lsat_1_v8_lg_8: 5243597-5245917 Lactuca sativa
Lsat_1_v5_gn_8_3980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 5243597-5245596 Lactuca sativa
Lsat_1_v5_gn_8_3980 5.0kb upstream 5.0kb upstream 5321   true Lsat_1_v8_lg_8: 5245597-5250917 Lactuca sativa
Lsat_1_v5_gn_8_3980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 5245918-5250917 Lactuca sativa
Lsat_1_v5_gn_8_3980 5.0kb downstream 5.0kb downstream 5321   true Lsat_1_v8_lg_8: 5240597-5245917 Lactuca sativa
Lsat_1_v5_gn_8_3980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 5240597-5245596 Lactuca sativa
Lsat_1_v5_gn_8_3980 10.0kb upstream 10.0kb upstream 10321   true Lsat_1_v8_lg_8: 5245597-5255917 Lactuca sativa
Lsat_1_v5_gn_8_3980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 5245918-5255917 Lactuca sativa
Lsat_1_v5_gn_8_3980 10.0kb downstream 10.0kb downstream 10321   true Lsat_1_v8_lg_8: 5235597-5245917 Lactuca sativa
Lsat_1_v5_gn_8_3980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 5235597-5245596 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478153 5263 Asterids View MSA
123744871 5271 Pentapetalae View MSA
122794258 5272 Eudicot View MSA
122048516 5273 Angiosperm View MSA
121310999 5274 Embryophyte View MSA
123348357 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain