Gene : Lsat_1_v5_gn_8_44620 L. sativa V8
Defline:  (1 of 10) PTHR23321//PTHR23321:SF31 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR // RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  1408
Name:  ? Lsat_1_v5_gn_8_44620 Secondary Identifier:  ? PAC:38952918
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CALVIN-PWY Lactuca sativa pathologic  
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_44620 0.5kb upstream 0.5kb upstream 1317   true Lsat_1_v8_lg_8: 61526764-61528080 Lactuca sativa
Lsat_1_v5_gn_8_44620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 61527581-61528080 Lactuca sativa
Lsat_1_v5_gn_8_44620 0.5kb downstream 0.5kb downstream 1317   true Lsat_1_v8_lg_8: 61526264-61527580 Lactuca sativa
Lsat_1_v5_gn_8_44620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 61526264-61526763 Lactuca sativa
Lsat_1_v5_gn_8_44620 1.0kb upstream 1.0kb upstream 1817   true Lsat_1_v8_lg_8: 61526764-61528580 Lactuca sativa
Lsat_1_v5_gn_8_44620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 61527581-61528580 Lactuca sativa
Lsat_1_v5_gn_8_44620 1.0kb downstream 1.0kb downstream 1817   true Lsat_1_v8_lg_8: 61525764-61527580 Lactuca sativa
Lsat_1_v5_gn_8_44620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 61525764-61526763 Lactuca sativa
Lsat_1_v5_gn_8_44620 2.0kb upstream 2.0kb upstream 2817   true Lsat_1_v8_lg_8: 61526764-61529580 Lactuca sativa
Lsat_1_v5_gn_8_44620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 61527581-61529580 Lactuca sativa
Lsat_1_v5_gn_8_44620 2.0kb downstream 2.0kb downstream 2817   true Lsat_1_v8_lg_8: 61524764-61527580 Lactuca sativa
Lsat_1_v5_gn_8_44620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 61524764-61526763 Lactuca sativa
Lsat_1_v5_gn_8_44620 5.0kb upstream 5.0kb upstream 5817   true Lsat_1_v8_lg_8: 61526764-61532580 Lactuca sativa
Lsat_1_v5_gn_8_44620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 61527581-61532580 Lactuca sativa
Lsat_1_v5_gn_8_44620 5.0kb downstream 5.0kb downstream 5817   true Lsat_1_v8_lg_8: 61521764-61527580 Lactuca sativa
Lsat_1_v5_gn_8_44620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 61521764-61526763 Lactuca sativa
Lsat_1_v5_gn_8_44620 10.0kb upstream 10.0kb upstream 10817   true Lsat_1_v8_lg_8: 61526764-61537580 Lactuca sativa
Lsat_1_v5_gn_8_44620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 61527581-61537580 Lactuca sativa
Lsat_1_v5_gn_8_44620 10.0kb downstream 10.0kb downstream 10817   true Lsat_1_v8_lg_8: 61516764-61527580 Lactuca sativa
Lsat_1_v5_gn_8_44620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 61516764-61526763 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121451238 5263 Asterids View MSA
123751247 5271 Pentapetalae View MSA
122773961 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain