Gene : Lsat_1_v5_gn_8_159460 L. sativa V8
Defline:  (1 of 1) PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  4660
Name:  ? Lsat_1_v5_gn_8_159460 Secondary Identifier:  ? PAC:38953694
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_159460 0.5kb upstream 0.5kb upstream 2433   true Lsat_1_v8_lg_8: 277571696-277574128 Lactuca sativa
Lsat_1_v5_gn_8_159460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 277573629-277574128 Lactuca sativa
Lsat_1_v5_gn_8_159460 0.5kb downstream 0.5kb downstream 2433   true Lsat_1_v8_lg_8: 277571196-277573628 Lactuca sativa
Lsat_1_v5_gn_8_159460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 277571196-277571695 Lactuca sativa
Lsat_1_v5_gn_8_159460 1.0kb upstream 1.0kb upstream 2933   true Lsat_1_v8_lg_8: 277571696-277574628 Lactuca sativa
Lsat_1_v5_gn_8_159460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 277573629-277574628 Lactuca sativa
Lsat_1_v5_gn_8_159460 1.0kb downstream 1.0kb downstream 2933   true Lsat_1_v8_lg_8: 277570696-277573628 Lactuca sativa
Lsat_1_v5_gn_8_159460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 277570696-277571695 Lactuca sativa
Lsat_1_v5_gn_8_159460 2.0kb upstream 2.0kb upstream 3933   true Lsat_1_v8_lg_8: 277571696-277575628 Lactuca sativa
Lsat_1_v5_gn_8_159460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 277573629-277575628 Lactuca sativa
Lsat_1_v5_gn_8_159460 2.0kb downstream 2.0kb downstream 3933   true Lsat_1_v8_lg_8: 277569696-277573628 Lactuca sativa
Lsat_1_v5_gn_8_159460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 277569696-277571695 Lactuca sativa
Lsat_1_v5_gn_8_159460 5.0kb upstream 5.0kb upstream 6933   true Lsat_1_v8_lg_8: 277571696-277578628 Lactuca sativa
Lsat_1_v5_gn_8_159460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 277573629-277578628 Lactuca sativa
Lsat_1_v5_gn_8_159460 5.0kb downstream 5.0kb downstream 6933   true Lsat_1_v8_lg_8: 277566696-277573628 Lactuca sativa
Lsat_1_v5_gn_8_159460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 277566696-277571695 Lactuca sativa
Lsat_1_v5_gn_8_159460 10.0kb upstream 10.0kb upstream 11933   true Lsat_1_v8_lg_8: 277571696-277583628 Lactuca sativa
Lsat_1_v5_gn_8_159460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 277573629-277583628 Lactuca sativa
Lsat_1_v5_gn_8_159460 10.0kb downstream 10.0kb downstream 11933   true Lsat_1_v8_lg_8: 277561696-277573628 Lactuca sativa
Lsat_1_v5_gn_8_159460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 277561696-277571695 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468959 5263 Asterids View MSA
123750797 5271 Pentapetalae View MSA
122786909 5272 Eudicot View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain