Gene : Lsat_1_v5_gn_8_158161 L. sativa V8
Defline:  (1 of 2) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31) Genomic Order:  4677
Name:  ? Lsat_1_v5_gn_8_158161 Secondary Identifier:  ? PAC:38956166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_158161 0.5kb upstream 0.5kb upstream 4468   true Lsat_1_v8_lg_8: 280587532-280591999 Lactuca sativa
Lsat_1_v5_gn_8_158161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 280591500-280591999 Lactuca sativa
Lsat_1_v5_gn_8_158161 0.5kb downstream 0.5kb downstream 4468   true Lsat_1_v8_lg_8: 280587032-280591499 Lactuca sativa
Lsat_1_v5_gn_8_158161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 280587032-280587531 Lactuca sativa
Lsat_1_v5_gn_8_158161 1.0kb upstream 1.0kb upstream 4968   true Lsat_1_v8_lg_8: 280587532-280592499 Lactuca sativa
Lsat_1_v5_gn_8_158161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 280591500-280592499 Lactuca sativa
Lsat_1_v5_gn_8_158161 1.0kb downstream 1.0kb downstream 4968   true Lsat_1_v8_lg_8: 280586532-280591499 Lactuca sativa
Lsat_1_v5_gn_8_158161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 280586532-280587531 Lactuca sativa
Lsat_1_v5_gn_8_158161 2.0kb upstream 2.0kb upstream 5968   true Lsat_1_v8_lg_8: 280587532-280593499 Lactuca sativa
Lsat_1_v5_gn_8_158161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 280591500-280593499 Lactuca sativa
Lsat_1_v5_gn_8_158161 2.0kb downstream 2.0kb downstream 5968   true Lsat_1_v8_lg_8: 280585532-280591499 Lactuca sativa
Lsat_1_v5_gn_8_158161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 280585532-280587531 Lactuca sativa
Lsat_1_v5_gn_8_158161 5.0kb upstream 5.0kb upstream 8968   true Lsat_1_v8_lg_8: 280587532-280596499 Lactuca sativa
Lsat_1_v5_gn_8_158161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 280591500-280596499 Lactuca sativa
Lsat_1_v5_gn_8_158161 5.0kb downstream 5.0kb downstream 8968   true Lsat_1_v8_lg_8: 280582532-280591499 Lactuca sativa
Lsat_1_v5_gn_8_158161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 280582532-280587531 Lactuca sativa
Lsat_1_v5_gn_8_158161 10.0kb upstream 10.0kb upstream 13968   true Lsat_1_v8_lg_8: 280587532-280601499 Lactuca sativa
Lsat_1_v5_gn_8_158161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 280591500-280601499 Lactuca sativa
Lsat_1_v5_gn_8_158161 10.0kb downstream 10.0kb downstream 13968   true Lsat_1_v8_lg_8: 280577532-280591499 Lactuca sativa
Lsat_1_v5_gn_8_158161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 280577532-280587531 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469903 5263 Asterids View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain