Gene : Lsat_1_v5_gn_8_160401 L. sativa V8
Defline:  (1 of 11) PTHR31642//PTHR31642:SF6 - FAMILY NOT NAMED // HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  4699
Name:  ? Lsat_1_v5_gn_8_160401 Secondary Identifier:  ? PAC:38956327
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-4203 Lactuca sativa pathologic  
Lsativa PWY-5835 Lactuca sativa pathologic  
Lsativa PWY-6801 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_160401 0.5kb upstream 0.5kb upstream 2232   true Lsat_1_v8_lg_8: 283849460-283851691 Lactuca sativa
Lsat_1_v5_gn_8_160401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 283849460-283849959 Lactuca sativa
Lsat_1_v5_gn_8_160401 0.5kb downstream 0.5kb downstream 2232   true Lsat_1_v8_lg_8: 283849960-283852191 Lactuca sativa
Lsat_1_v5_gn_8_160401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 283851692-283852191 Lactuca sativa
Lsat_1_v5_gn_8_160401 1.0kb upstream 1.0kb upstream 2732   true Lsat_1_v8_lg_8: 283848960-283851691 Lactuca sativa
Lsat_1_v5_gn_8_160401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 283848960-283849959 Lactuca sativa
Lsat_1_v5_gn_8_160401 1.0kb downstream 1.0kb downstream 2732   true Lsat_1_v8_lg_8: 283849960-283852691 Lactuca sativa
Lsat_1_v5_gn_8_160401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 283851692-283852691 Lactuca sativa
Lsat_1_v5_gn_8_160401 2.0kb upstream 2.0kb upstream 3732   true Lsat_1_v8_lg_8: 283847960-283851691 Lactuca sativa
Lsat_1_v5_gn_8_160401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 283847960-283849959 Lactuca sativa
Lsat_1_v5_gn_8_160401 2.0kb downstream 2.0kb downstream 3732   true Lsat_1_v8_lg_8: 283849960-283853691 Lactuca sativa
Lsat_1_v5_gn_8_160401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 283851692-283853691 Lactuca sativa
Lsat_1_v5_gn_8_160401 5.0kb upstream 5.0kb upstream 6732   true Lsat_1_v8_lg_8: 283844960-283851691 Lactuca sativa
Lsat_1_v5_gn_8_160401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 283844960-283849959 Lactuca sativa
Lsat_1_v5_gn_8_160401 5.0kb downstream 5.0kb downstream 6732   true Lsat_1_v8_lg_8: 283849960-283856691 Lactuca sativa
Lsat_1_v5_gn_8_160401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 283851692-283856691 Lactuca sativa
Lsat_1_v5_gn_8_160401 10.0kb upstream 10.0kb upstream 11732   true Lsat_1_v8_lg_8: 283839960-283851691 Lactuca sativa
Lsat_1_v5_gn_8_160401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 283839960-283849959 Lactuca sativa
Lsat_1_v5_gn_8_160401 10.0kb downstream 10.0kb downstream 11732   true Lsat_1_v8_lg_8: 283849960-283861691 Lactuca sativa
Lsat_1_v5_gn_8_160401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 283851692-283861691 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478875 5263 Asterids View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain